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Kleborate 0.3.0 #12657

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42 changes: 42 additions & 0 deletions recipes/kleborate/meta.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,42 @@
{% set name = "Kleborate" %}
{% set repo_owner = "katholt" %}
{% set version = "0.3.0" %}
{% set hash_type = "sha256" %}
{% set hash_value = "2b666e8aee77a76c1f85434220ecee31cc9cfa28d35fc4b799558570e4c9b84e" %}

package:
name: {{ name|lower }}
version: {{ version }}

source:
url: https://github.com/{{ repo_owner }}/{{ name }}/archive/v{{ version }}.tar.gz
{{ hash_type }}: {{ hash_value }}

build:
noarch: python
number: 0
script: $PYTHON setup.py install --single-version-externally-managed --record=record.txt

requirements:
build:
- python
- setuptools
- blast >=2.2.31
- mash
run:
- python
- blast >=2.2.31
- mash

test:
commands:
- kleborate -h

about:
home: https://github.com/katholt/Kleborate
license: GNU General Public License v3 or later (GPLv3+)
summary: 'A tool to screen Klebiella genome assembiles for: MLST sequence type,
species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.),
ICEKp associated virulence loci: yersiniabactin (ybt), colibactin (clb), virulence plasmid associated loci: salmochelin (iro), aerobactin (iuc), hypermucoidy (rmpA, rmpA2), antimicrobial resistance genes, including quinolone resistance SNPs and colistin resistance truncations,
and K (capsule) and O antigen (LPS) serotype prediction, via wzi alleles and Kaptive.'
license_family: GPL3