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Bump deepTools and its dependencies #13442

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Feb 2, 2019
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2 changes: 1 addition & 1 deletion recipes/bcftools/1.2/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ package:
name: bcftools
version: "1.2"
build:
number: 3
number: 4
source:
url: https://github.com/samtools/bcftools/releases/download/1.2/bcftools-1.2.tar.bz2
md5: 8044bed8fce62f7072fc6835420f0906
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2 changes: 1 addition & 1 deletion recipes/bcftools/1.3.1/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ about:
VCF and BCF and streams will work in most, but not all situations.

build:
number: 3
number: 4

package:
name: bcftools
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2 changes: 1 addition & 1 deletion recipes/bcftools/1.3/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ test:
- bcftools --version

build:
number: 2
number: 3

package:
name: bcftools
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2 changes: 1 addition & 1 deletion recipes/bcftools/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ about:
VCF and BCF and streams will work in most, but not all situations.

build:
number: 0
number: 1
package:
name: bcftools
version: {{ version }}
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2 changes: 1 addition & 1 deletion recipes/deeptools/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ source:
sha256: bfbaf077d5206871f237fa4a8fd0da8ecf0d22f4e868fc6eeb215fd14574f3fb

build:
number: 0
number: 1

requirements:
build:
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2 changes: 1 addition & 1 deletion recipes/htslib/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ package:
version: {{ version }}

build:
number: 4
number: 5

source:
url: https://github.com/samtools/htslib/releases/download/{{ version }}/htslib-{{ version }}.tar.bz2
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2 changes: 1 addition & 1 deletion recipes/libdeflate/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ source:
sha256: {{ sha256 }}

build:
number: 0
number: 1

requirements:
build:
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4 changes: 3 additions & 1 deletion recipes/py2bit/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -3,13 +3,15 @@ package:
version: "0.3.0"

build:
number: 1
number: 2

source:
url: https://files.pythonhosted.org/packages/53/bb/547a927bed736ead3dc909e1e552d57c9034bb9493eff80544c0cf6e4828/py2bit-0.3.0.tar.gz
md5: 544a4bb602985d4026da0e01d96d2e3d

requirements:
build:
- {{ compiler('c') }}
host:
- python
- setuptools
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10 changes: 0 additions & 10 deletions recipes/pybigwig/0.1.11/build.sh

This file was deleted.

29 changes: 0 additions & 29 deletions recipes/pybigwig/0.1.11/meta.yaml

This file was deleted.

2 changes: 1 addition & 1 deletion recipes/pybigwig/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ source:
sha256: c65cb9ccd78a4ede00c3209579173e4f7e67598daf6dc079676a0e8982163f5b

build:
number: 0
number: 1

requirements:
build:
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6 changes: 3 additions & 3 deletions recipes/pysam/0.10.0/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ source:
- osx_rpath.patch [osx]

build:
number: 6
number: 7
skip: False
binary_relocation: False # [linux]
script: python -m pip install --no-deps --ignore-installed .
Expand All @@ -22,7 +22,7 @@ requirements:
- samtools >=1.3,<1.4
- bcftools >=1.3,<1.4
- cython
- python
- python <3.7
- pip
- setuptools
- zlib
Expand All @@ -31,7 +31,7 @@ requirements:
- htslib >=1.3,<1.4
- samtools >=1.3,<1.4
- bcftools >=1.3,<1.4
- python
- python <3.7
- zlib
- curl

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2 changes: 1 addition & 1 deletion recipes/pysam/0.7.7/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ source:
sha256: c9f3018482eec99ee199dda3fdef2aa7424dde6574672a4c0d209a10985755cc

build:
number: 2
number: 3
skip: True # [not py27]

requirements:
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6 changes: 3 additions & 3 deletions recipes/pysam/0.8.3/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,18 +7,18 @@ source:
md5: b1ae2a8ec3c6d20be30b2bc1aa995bbf

build:
number: 5
number: 6

requirements:
build:
- {{ compiler('c') }}
host:
- python
- python <3.7
- setuptools
- cython
- zlib
run:
- python
- python <3.7
- zlib

test:
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6 changes: 3 additions & 3 deletions recipes/pysam/0.9.1/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ source:
md5: d87765ad1e0afe534255c20cce5478e4

build:
number: 5
number: 6
skip: False

requirements:
Expand All @@ -18,15 +18,15 @@ requirements:
- samtools ==1.3.1
- bcftools ==1.3.1
- cython
- python
- python <3.7
- setuptools
- zlib
- curl
run:
- htslib ==1.3.1
- samtools ==1.3.1
- bcftools ==1.3.1
- python
- python <3.7
- zlib
- curl

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2 changes: 1 addition & 1 deletion recipes/pysam/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ source:
sha256: 8cb3dd70f0d825086ac059ec2445ebd2ec5f14af73e7f1f4bd358966aaee5ed3

build:
number: 0
number: 1
skip: False
binary_relocation: False # [linux]

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2 changes: 1 addition & 1 deletion recipes/samtools/1.6/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ package:
version: {{ version }}

build:
number: 1
number: 2

source:
url: https://github.com/samtools/samtools/releases/download/{{ version }}/samtools-{{ version }}.tar.bz2
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2 changes: 1 addition & 1 deletion recipes/samtools/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ package:
version: {{ version }}

build:
number: 1
number: 2

source:
url: https://github.com/samtools/samtools/releases/download/{{ version }}/samtools-{{ version }}.tar.bz2
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