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SEPP: Update to version 4.3.10 #16958

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merged 12 commits into from
Aug 27, 2019
Merged

SEPP: Update to version 4.3.10 #16958

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d60ec32
Update to version 4.3.10
sjanssen2 Aug 18, 2019
004ca43
search binaries in $PREFIX
sjanssen2 Aug 19, 2019
37a3343
Merge branch 'version_update_4310' of https://github.com/bioconda/bio…
sjanssen2 Aug 21, 2019
3815629
debugging
sjanssen2 Aug 21, 2019
e865063
Merge branch 'master' into version_update_4310
dpryan79 Aug 27, 2019
730bd35
debug a bit, this actually passes locally, possibly due to a differen…
dpryan79 Aug 27, 2019
aee5384
Update meta.yaml
dpryan79 Aug 27, 2019
6a8005c
more debugging
dpryan79 Aug 27, 2019
e24e729
maybe
dpryan79 Aug 27, 2019
42fa7fa
no slash?
dpryan79 Aug 27, 2019
c562331
not in . directories
dpryan79 Aug 27, 2019
594af5b
remove debug test
dpryan79 Aug 27, 2019
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8 changes: 4 additions & 4 deletions recipes/sepp/build.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -3,12 +3,12 @@
python setup.py config -c

# ensure SEPP's configuration file is at the correct location ...
echo "${PREFIX}/share/sepp/.sepp" > home.path
mkdir -p $PREFIX/share/sepp/.sepp
echo "${PREFIX}/share/sepp/sepp" > home.path
mkdir -p $PREFIX/share/sepp/sepp
# ... and holds correct path names
mv -v sepp-package/sepp/default.main.config $PREFIX/share/sepp/.sepp/main.config
mv -v sepp-package/sepp/default.main.config $PREFIX/share/sepp/sepp/main.config

python setup.py install
python setup.py install

# copy bundled binaries, but hmmer which should be provided by conda, into $PREFIX/bin/
mkdir -p $PREFIX/bin/
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4 changes: 2 additions & 2 deletions recipes/sepp/meta.yaml
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@@ -1,5 +1,5 @@
{% set version = "4.3.9" %}
{% set sha256 = "58b043d27278bf4d9cab81216f32192c6316094b05ae3cfaaa4acfba02c9713a" %}
{% set version = "4.3.10" %}
{% set sha256 = "24d8d410138563017e6f2f1263d5e34427f5bbddb875b72a036f7c879cef203b" %}
package:
name: sepp
version: '{{version}}'
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