Minia

recipes/minia/build.sh

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+#!/bin/bash
+export CPATH=${PREFIX}/include
+export LIBRARY_PATH=${PREFIX}/lib
+rm -rf build
+mkdir build
+cd build
+cmake -DCMAKE_CXX_FLAGS="$CXXFLAGS -DUSE_NEW_CXX" ..
+make -j2
+
+mkdir -p $PREFIX/bin/
+
+cp bin/minia ${PREFIX}/bin/
+cp bin/merci ${PREFIX}/bin/
+chmod +x $PREFIX/bin/minia
+chmod +x $PREFIX/bin/merci
+
+cp ext/gatb-core/bin/gatb-h5dump ${PREFIX}/bin/
+chmod +x $PREFIX/bin/gatb-h5dump
+

recipes/minia/meta.yaml

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+{% set version = "3.2.1" %}
+{% set sha256 = "c431915f034bc58887f9a14f6f65be2c83e0faae312ef330c3a11c6ba131162c" %}
+
+package:
+  name: minia
+  version: {{ version }} 
+
+build:
+  number: 0
+  # requires clang>=4.5
+  skip: True  # [osx]
+
+source:
+  url: https://github.com/GATB/minia/releases/download/v{{version}}/minia-v{{version}}-Source.tar.gz
+  sha256: {{ sha256 }}
+
+requirements:
+  build:
+    - {{ compiler('cxx') }}
+    - cmake
+  host:
+    - zlib
+  run:
+    - zlib
+
+test:
+  commands:
+    - minia -help
+
+about:
+  home: https://github.com/GATB/minia
+  license: file
+  license_file: LICENSE
+  summary: Minia is a short-read assembler based on a de Bruijn graph, capable of assembling a human genome on a desktop computer in a day.
+
+extra:
+  identifiers:
+    - biotools:miniax