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Update trgt to 1.2.0 #51017

Merged
merged 1 commit into from
Sep 27, 2024
Merged

Update trgt to 1.2.0 #51017

merged 1 commit into from
Sep 27, 2024

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@BiocondaBot BiocondaBot commented Sep 27, 2024

Update trgt: 1.1.01.2.0

install with bioconda Conda

Info Link or Description
Recipe recipes/trgt (click to view/edit other files)
Summary Tandem repeat genotyping and visualization from PacBio HiFi data
Home https://github.com/PacificBiosciences/trgt
Releases
Recipe Maintainer(s) @zeeev, @williamrowell, @tmokveld
Author @PacificBiosciences

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Sep 27, 2024
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coderabbitai bot commented Sep 27, 2024

📝 Walkthrough

Walkthrough

The pull request updates the package "trgt" by incrementing its version from "1.1.0" to "1.2.0" and modifying the SHA256 checksum for integrity verification. These changes reflect a new release of the package, ensuring that the versioning and checksum are current and accurate.

Changes

Files Change Summary
recipes/trgt/meta.yaml - Version updated from "1.1.0" to "1.2.0"
- SHA256 checksum updated from "70e389deb2d2c9e65284d929a476cd8c6cd8b84afc81778485ba976c272d5500" to "5dec0943d3400fd1677236fa35737e5a442a486fac55188029c3c9164edb3d23"

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Actionable comments posted: 0

🧹 Outside diff range and nitpick comments (1)
recipes/trgt/meta.yaml (1)

Line range hint 1-43: Consider making the package noarch.

The recipe is currently set to noarch: false and skips building for non-linux64 platforms. However, since the package is a pre-built binary for linux64, it might be more appropriate to make it a noarch package with a constrains section.

Consider the following changes:

 build:
   number: 0
-  skip: true  # [not linux64]
-  noarch: false
+  noarch: generic
   script:
     - mkdir -p ${PREFIX}/bin
     - cp trgt ${PREFIX}/bin/
     - chmod +x ${PREFIX}/bin/trgt
   run_exports:
     - {{ pin_subpackage('trgt', max_pin="x") }}

+requirements:
+  run:
+    - linux-64 *
+
 test:
   commands:
     - trgt --version

This change would make the package noarch while still ensuring it's only installed on linux-64 systems. Please consult with other maintainers to decide if this change is appropriate for your use case.

🧰 Tools
🪛 yamllint

[error] 1-1: syntax error: found character '%' that cannot start any token

(syntax)

📜 Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Files that changed from the base of the PR and between d639ba4 and 2487d26.

📒 Files selected for processing (1)
  • recipes/trgt/meta.yaml (1 hunks)
🔇 Additional comments (2)
recipes/trgt/meta.yaml (2)

3-3: Checksum update looks good, but verification is recommended.

The SHA256 checksum has been updated, which is necessary for the new version. However, it's crucial to verify its correctness.

To ensure the integrity and security of the package, please run the following verification:

If the script output matches the checksum, it confirms the integrity of the package.


2-2: Version update looks good.

The version has been correctly updated to 1.2.0, which aligns with the PR objectives.

Let's verify if this version update is consistent throughout the file:

@tmokveld
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@BiocondaBot please add label

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