Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update tirmite to 1.1.6 #51842

Merged
merged 1 commit into from
Oct 31, 2024
Merged

Update tirmite to 1.1.6 #51842

merged 1 commit into from
Oct 31, 2024

Conversation

BiocondaBot
Copy link
Collaborator

Update tirmite: 1.1.51.1.6

install with bioconda Conda

Info Link or Description
Recipe recipes/tirmite (click to view/edit other files)
Summary Map TIR-pHMM models to genomic sequences for annotation of MITES and complete DNA-Transposons.
Home https://github.com/Adamtaranto/TIRmite
Releases https://pypi.org/pypi/tirmite/json
Recipe Maintainer(s) @adam Taranto

This pull request was automatically generated (see docs).

@BiocondaBot BiocondaBot added autobump Automatic Version Update new version labels Oct 31, 2024
Copy link
Contributor

coderabbitai bot commented Oct 31, 2024

📝 Walkthrough

Walkthrough

The pull request introduces updates to the meta.yaml file for the tirmite package. The version number is incremented from 1.1.5 to 1.1.6. Alongside this change, the SHA256 hash value is updated from 01d2180d073da1786d5236296e51952281c58cb1124aa254345b3d6ab63a1721 to 9267c94ec12db1c385a5fd6aca8b85d88005ee69ebf42b5e8dd92418454ae26e. Additionally, the build number is modified from 1 to 0. The remaining content of the file, which includes package metadata, source URL, build specifications, requirements, test commands, and other information, remains unchanged. These updates reflect standard versioning practices and ensure the integrity of the package's distribution.

Possibly related PRs

  • Update tirmite to 1.1.5 #51713: This PR updates the tirmite package from version 1.1.4 to 1.1.5, which is directly related to the main PR that updates the version from 1.1.5 to 1.1.6.
  • Update TIRmite recipe #51835: This PR also pertains to the tirmite package, focusing on changes to the meta.yaml file, including updates to the build number and dependency versions, which are relevant to the ongoing maintenance of the package.

📜 Recent review details

Configuration used: CodeRabbit UI
Review profile: CHILL

📥 Commits

Reviewing files that changed from the base of the PR and between 3deb6c1 and c044a6b.

📒 Files selected for processing (1)
  • recipes/tirmite/meta.yaml (2 hunks)
🔇 Additional comments (3)
recipes/tirmite/meta.yaml (3)

2-2: LGTM: Version update matches PyPI release

The version bump to 1.1.6 aligns with the latest PyPI release.


17-17: LGTM: Build number correctly reset

The build number is appropriately reset to 0 for the new version, following conda-forge packaging guidelines.


5-5: Verify SHA256 hash against PyPI package

The hash format is valid. Let's verify it matches the PyPI package.


Thank you for using CodeRabbit. We offer it for free to the OSS community and would appreciate your support in helping us grow. If you find it useful, would you consider giving us a shout-out on your favorite social media?

❤️ Share
🪧 Tips

Chat

There are 3 ways to chat with CodeRabbit:

  • Review comments: Directly reply to a review comment made by CodeRabbit. Example:
    • I pushed a fix in commit <commit_id>, please review it.
    • Generate unit testing code for this file.
    • Open a follow-up GitHub issue for this discussion.
  • Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
    • @coderabbitai generate unit testing code for this file.
    • @coderabbitai modularize this function.
  • PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
    • @coderabbitai gather interesting stats about this repository and render them as a table. Additionally, render a pie chart showing the language distribution in the codebase.
    • @coderabbitai read src/utils.ts and generate unit testing code.
    • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
    • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

  • @coderabbitai pause to pause the reviews on a PR.
  • @coderabbitai resume to resume the paused reviews.
  • @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
  • @coderabbitai full review to do a full review from scratch and review all the files again.
  • @coderabbitai summary to regenerate the summary of the PR.
  • @coderabbitai resolve resolve all the CodeRabbit review comments.
  • @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
  • @coderabbitai help to get help.

Other keywords and placeholders

  • Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
  • Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
  • Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

  • You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
  • Please see the configuration documentation for more information.
  • If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

  • Visit our Documentation for detailed information on how to use CodeRabbit.
  • Join our Discord Community to get help, request features, and share feedback.
  • Follow us on X/Twitter for updates and announcements.

@mencian mencian merged commit 5a4bc1f into master Oct 31, 2024
6 checks passed
@mencian mencian deleted the bump/tirmite branch October 31, 2024 20:32
This was referenced Nov 1, 2024
@coderabbitai coderabbitai bot mentioned this pull request Nov 9, 2024
@coderabbitai coderabbitai bot mentioned this pull request Nov 19, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
autobump Automatic Version Update new version
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants