Skip to content

Commit

Permalink
Merge pull request #27 from bioio-devs/admin/remove-special-case-for-…
Browse files Browse the repository at this point in the history
…s3-paths

Remove special case for S3 paths
  • Loading branch information
SeanLeRoy authored Aug 20, 2024
2 parents 0f3976d + dc4a0b6 commit 1430f63
Showing 1 changed file with 0 additions and 7 deletions.
7 changes: 0 additions & 7 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -49,13 +49,6 @@ path = "https://allencell.s3.amazonaws.com/aics/nuc-morph-dataset/hipsc_fov_nucl
image = BioImage(path)
print(image.get_image_dask_data())
```
If using an `s3://` path to access a public S3 bucket, the `BioImage` constructor must be given a dictionary with `anon: True` in the `fs_kwargs` argument.
```python
from bioio import BioImage
path = "s3://allencell/aics/nuc-morph-dataset/hipsc_fov_nuclei_timelapse_dataset/hipsc_fov_nuclei_timelapse_data_used_for_analysis/baseline_colonies_fov_timelapse_dataset/20200323_09_small/raw.ome.zarr"
image = BioImage(path, fs_kwargs=dict(anon=True))
print(image.get_image_dask_data())
```

## Issues
[_Click here to view all open issues in bioio-devs organization at once_](https://github.com/search?q=user%3Abioio-devs+is%3Aissue+is%3Aopen&type=issues&ref=advsearch) or check this repository's issue tab.
Expand Down

0 comments on commit 1430f63

Please sign in to comment.