Merge branch 'master' of https://github.com/biolink/biolink-model

biolink · Apr 3, 2023 · ef0fbb3 · ef0fbb3
2 parents c304ed5 + 0ad928c
commit ef0fbb3
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diff --git a/biolink-model.graphql b/biolink-model.graphql
diff --git a/biolink-model.owl.ttl b/biolink-model.owl.ttl
diff --git a/biolink-model.proto b/biolink-model.proto
diff --git a/biolink-model.shacl.ttl b/biolink-model.shacl.ttl
diff --git a/biolink-model.shexj b/biolink-model.shexj
@@ -1,5 +1,5 @@
 # metamodel_version: 1.7.0
-# version: 3.2.4
+# version: 3.2.5
 {
    "type": "Schema",
    "@context": [
@@ -908,6 +908,83 @@
                               "min": 0,
                               "max": 1
                            },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/subject_category",
+                              "valueExpr": "https://w3id.org/biolink/vocab/OntologyClass",
+                              "min": 0,
+                              "max": 1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/object_category",
+                              "valueExpr": "https://w3id.org/biolink/vocab/OntologyClass",
+                              "min": 0,
+                              "max": 1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/subject_closure",
+                              "valueExpr": "https://w3id.org/linkml/String",
+                              "min": 0,
+                              "max": -1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/object_closure",
+                              "valueExpr": "https://w3id.org/linkml/String",
+                              "min": 0,
+                              "max": -1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/subject_category_closure",
+                              "valueExpr": "https://w3id.org/biolink/vocab/OntologyClass",
+                              "min": 0,
+                              "max": -1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/object_category_closure",
+                              "valueExpr": "https://w3id.org/biolink/vocab/OntologyClass",
+                              "min": 0,
+                              "max": -1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/subject_namespace",
+                              "valueExpr": "https://w3id.org/linkml/String",
+                              "min": 0,
+                              "max": 1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/object_namespace",
+                              "valueExpr": "https://w3id.org/linkml/String",
+                              "min": 0,
+                              "max": 1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/subject_label_closure",
+                              "valueExpr": "https://w3id.org/linkml/String",
+                              "min": 0,
+                              "max": -1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/object_label_closure",
+                              "valueExpr": "https://w3id.org/linkml/String",
+                              "min": 0,
+                              "max": -1
+                           },
+                           {
+                              "type": "TripleConstraint",
+                              "predicate": "https://w3id.org/biolink/vocab/retrieval_source_ids",
+                              "valueExpr": "https://w3id.org/biolink/vocab/RetrievalSource",
+                              "min": 0,
+                              "max": -1
+                           },
                            {
                               "type": "TripleConstraint",
                               "predicate": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type",
@@ -14560,7 +14637,7 @@
                      },
                      {
                         "type": "TripleConstraint",
-                        "predicate": "https://w3id.org/biolink/vocab/resource",
+                        "predicate": "https://w3id.org/biolink/vocab/resource_id",
                         "valueExpr": "https://w3id.org/linkml/Uriorcurie",
                         "min": 1,
                         "max": 1
@@ -14574,7 +14651,7 @@
                      },
                      {
                         "type": "TripleConstraint",
-                        "predicate": "https://w3id.org/biolink/vocab/upstream_resources",
+                        "predicate": "https://w3id.org/biolink/vocab/upstream_resource_ids",
                         "valueExpr": "https://w3id.org/linkml/Uriorcurie",
                         "min": 0,
                         "max": 1