Add new prefixes appearing in GSSO cross-references (#1310)

This includes the following new prefixes: 1. coexistence 2. glottolog 3. homosaurus 4. lccn 5. linguist.gold 6. merriamwebster 7. wiktionary
biopragmatics · Dec 12, 2024 · 9c81bc7 · 9c81bc7
1 parent c012eef
commit 9c81bc7
Showing 1 changed file with 136 additions and 0 deletions.
diff --git a/src/bioregistry/data/bioregistry.json b/src/bioregistry/data/bioregistry.json
@@ -20628,6 +20628,21 @@
       "https://www.ebi.ac.uk/arrayexpress/files/A-GEHB-1/A-GEHB-1.adf.txt"
     ]
   },
+  "coexistence": {
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "description": "COEXISTENCE - Thesaurus of intersectionality and decolonial issues: black studies, gender, sexuality and feminist studies",
+    "example": "163",
+    "github_request_issue": 1310,
+    "homepage": "https://mamoura.eci.ufmg.br",
+    "name": "COEXISTENCE",
+    "pattern": "^\\d+$",
+    "uri_format": "https://mamoura.eci.ufmg.br/tematres/vocab/index.php?tema=$1"
+  },
   "cog": {
     "biolink": {
       "is_identifiers": false,
@@ -44800,6 +44815,24 @@
       "uri_format": "http://pharminfo.pharm.kyoto-u.ac.jp/services/glida/ligand_information.php?id=$1"
     }
   },
+  "glottolog": {
+    "appears_in": [
+      "gsso"
+    ],
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "description": " Comprehensive reference information for the world's languages, especially the lesser known languages. [from homepage]",
+    "example": "nort3314",
+    "github_request_issue": 1310,
+    "homepage": "https://glottolog.org",
+    "license": "CC-BY-4.0",
+    "name": "Glottolog",
+    "uri_format": "https://glottolog.org/resource/languoid/id/$1"
+  },
   "glycoepitope": {
     "biocontext": {
       "prefix": "GLYCOEPITOPE"
@@ -51218,6 +51251,46 @@
       "uri_format": "https://www.ncbi.nlm.nih.gov/homologene?term=$1"
     }
   },
+  "homosaurus": {
+    "appears_in": [
+      "gsso"
+    ],
+    "contact": {
+      "email": "adolphok@vcu.edu",
+      "name": "Keahi Kaʻiwalani Adolpho",
+      "orcid": "0000-0003-1769-112X"
+    },
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "description": "An international LGBTQ+ linked data vocabulary",
+    "example": "queerNewspapers",
+    "github_request_issue": 1310,
+    "homepage": "http://homosaurus.org",
+    "license": "CC BY NC-ND 4.0",
+    "name": "Homosaurus",
+    "providers": [
+      {
+        "code": "homosaurus.v3",
+        "description": "Homosaurus API v3",
+        "homepage": "https://homosaurus.org",
+        "name": "Homosaurus API v3",
+        "uri_format": "http://homosaurus.org/v3/$1"
+      },
+      {
+        "code": "homosaurus.v2",
+        "description": "Homosaurus API v2",
+        "homepage": "https://homosaurus.org",
+        "name": "Homosaurus API v2",
+        "uri_format": "http://homosaurus.org/v2/$1"
+      }
+    ],
+    "repository": "https://github.com/DigitalTransgenderArchive/homosaurus_site",
+    "uri_format": "http://homosaurus.org/terms/$1"
+  },
   "horizon_discovery": {
     "cellosaurus": {
       "category": "Cell line collections (Providers)",
@@ -62004,6 +62077,21 @@
     "repository": "https://github.com/AnimalGenome/livestock-breed-ontology",
     "uri_format": "https://bioportal.bioontology.org/ontologies/LBO/?p=classes&conceptid=http://purl.obolibrary.org/obo/LBO_$1"
   },
+  "lccn": {
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "description": "LCCN Permalinks are persistent URLs for bibliographic records in the LC Catalog and authority records in LC Authorities. These links are constructed using the record's LCCN (or Library of Congress Control Number), an identifier assigned by the Library of Congress to bibliographic and authority records. LCCN Permalinks are also available for citation records in the Handbook for Latin American Studies (HLAS). [from homepage]",
+    "example": "2011488555",
+    "github_request_issue": 1310,
+    "homepage": "https://lccn.loc.gov",
+    "name": "Library of Congress Control Number",
+    "pattern": "^\\d+$",
+    "uri_format": "https://lccn.loc.gov/$1"
+  },
   "lcsh": {
     "bartoc": {
       "abbreviation": "LCSH",
@@ -62747,6 +62835,22 @@
     },
     "repository": "https://github.com/github/linguist"
   },
+  "linguist.gold": {
+    "comment": "This resource has been deprecated and was last released in 2010. The homepage links to a zip folder that includes an OWL artifact, but it doesn't follow any typical standards. The ontology browser is not perfect, it only works for classes.",
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "deprecated": true,
+    "example": "Term",
+    "github_request_issue": 1310,
+    "homepage": "https://linguistlist.org/gold/",
+    "name": "Genderal Ontology for Linguistic Description",
+    "rdf_uri_format": "http://purl.org/linguistics/gold/$1",
+    "uri_format": "https://lambdamusic.github.io/ontospy-examples/gold-2010owl/class-gold$1.html"
+  },
   "linkedin": {
     "contributor": {
       "email": "cthoyt@gmail.com",
@@ -66246,6 +66350,23 @@
     ],
     "uri_format": "https://www.ebi.ac.uk/merops/cgi-bin/famsum?family=$1"
   },
+  "merriamwebster": {
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "description": "Online Dictionary",
+    "example": "buccal_gland",
+    "github_request_issue": 1310,
+    "homepage": "https://www.merriam-webster.com",
+    "name": "Merriam Webster Dictionary",
+    "synonyms": [
+      "merriam_webster"
+    ],
+    "uri_format": "https://www.merriam-webster.com/dictionary/$1"
+  },
   "mesh": {
     "aberowl": {
       "description": "Medical Subject Headings (MeSH);National Library of Medicine; 2011",
@@ -120703,6 +120824,21 @@
       "wikipedia"
     ]
   },
+  "wiktionary": {
+    "contributor": {
+      "email": "cthoyt@gmail.com",
+      "github": "cthoyt",
+      "name": "Charles Tapley Hoyt",
+      "orcid": "0000-0003-4423-4370"
+    },
+    "description": "A free dictionary",
+    "example": "pharmacist",
+    "github_request_issue": 1310,
+    "homepage": "https://wiktionary.org",
+    "license": "CC BY SA 4.0",
+    "name": "Wiktionary",
+    "uri_format": "https://en.wiktionary.org/wiki/$1"
+  },
   "worfdb": {
     "biocontext": {
       "prefix": "WORFDB"