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Add prefix: biodolphin #1327

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merged 3 commits into from
Dec 19, 2024
Merged

Add prefix: biodolphin #1327

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609278f
Add prefix: biodolphin
nagutm Dec 13, 2024
f478cf9
Merge branch 'main' into biodolphin
bgyori Dec 19, 2024
41a2603
Add reviewer info
bgyori Dec 19, 2024
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35 changes: 35 additions & 0 deletions src/bioregistry/data/bioregistry.json
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Original file line number Diff line number Diff line change
Expand Up @@ -8375,6 +8375,41 @@
},
"pattern": "^\\d{11}$"
},
"biodolphin": {
"contact": {
"email": "andrew.mcshan@chemistry.gatech.edu",
"name": "Andrew C. McShan",
"orcid": "0000-0002-3212-9867"
},
"contributor": {
"email": "m.naguthana@hotmail.com",
"github": "nagutm",
"name": "Mufaddal Naguthanawala",
"orcid": "0009-0009-5240-7463"
},
"description": "Identifiers for lipid-protein interactions, including details about protein functions, protein families, lipid classifications, lipid-protein binding affinities, membrane association type, and atomic structures.",
"example": "BD1a05-A-A-IPM1",
"github_request_issue": 1327,
"homepage": "https://biodolphin.chemistry.gatech.edu",
"name": "BioDolphin",
"pattern": "^BD\\d[a-zA-Z0-9]+-[A-Za-z]-[A-Za-z]-[A-Za-z0-9]+$",
"publications": [
{
"doi": "10.1038/s42004-024-01384-z",
"pmc": "PMC11618342",
"pubmed": "39633021",
"title": "BioDolphin as a comprehensive database of lipid-protein binding interactions",
"year": 2024
}
],
"reviewer": {
"email": "b.gyori@northeastern.edu",
"github": "bgyori",
"name": "Benjamin M. Gyori",
"orcid": "0000-0001-9439-5346"
},
"uri_format": "https://biodolphin.chemistry.gatech.edu/detail/$1"
},
"biofactoid": {
"contact": {
"email": "jeffvin.wong@utoronto.ca",
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1 change: 1 addition & 0 deletions src/bioregistry/data/curated_papers.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -125,6 +125,7 @@ pubmed relevant orcid date_curated relevancy_type pr_added notes
39616207 0 0009-0009-5240-7463 2024-12-09 irrelevant_other 1305
39626458 0 0009-0009-5240-7463 2024-12-10 irrelevant_other 1305
39629064 0 0009-0009-5240-7463 2024-12-09 irrelevant_other 1305
39633021 1 0009-0009-5240-7463 2024-12-12 new_prefix 1327 Identifiers for lipid-protein interactions
39633723 0 0009-0009-5240-7463 2024-12-11 irrelevant_other 1305
39651210 0 0009-0009-5240-7463 2024-12-09 irrelevant_other 1305
39651266 0 0009-0009-5240-7463 2024-12-11 irrelevant_other 1305
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