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[tracking] data model update#211

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cthoyt wants to merge 76 commits intomainbiopragmatics/pyobo:mainfrom update-modelbiopragmatics/pyobo:update-modelCopy head branch name to clipboard

+971-463

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Commits on Nov 5, 2024

• More carefully track object types

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  d9e82a4

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• Update struct.py

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  beb7121

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• Cleanup

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Commits on Nov 9, 2024

• Lots of improvements

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• Udate

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Commits on Nov 10, 2024

• Add unimod source

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Commits on Nov 16, 2024

• Improve processing and specifically synonym processing

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• Add more curations

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• Update getters.py

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• Merge branch 'main' into update-model

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• Update CLI functions

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Commits on Nov 17, 2024

• Sort

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• Update CURIE parsing

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• Update metadata.py

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• Update getters.py

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• Simplify

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• Merge branch 'main' into update-model

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• Merge branch 'main' into update-model

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• Update struct.py

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• Merge branch 'main' into update-model

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• Update struct.py

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• Merge branch 'main' into update-model

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Commits on Nov 18, 2024

• Merge branch 'main' into update-model

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• Fix imports

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• Merge branch 'main' into update-model

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• Update alts.py

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• Merge branch 'main' into update-model

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• Update __init__.py

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• Update xrefs.py

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• Merge branch 'main' into update-model

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• Update names.py

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• Update metadata.py

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• Merge branch 'main' into update-model

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• Merge branch 'main' into update-model

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• Update ro.py

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Commits on Nov 19, 2024

• Merge branch 'main' into update-model

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• Update typedef.py

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• Merge branch 'main' into update-model

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  c5cf6ca

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• Cleanup

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  47755e0

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• Update typedef chomping

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  1bda9e6

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• Fix typo

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• Uip

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• Merge branch 'main' into update-model

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• Merge branch 'main' into update-model

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  66e23cc

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• Update

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• Renames

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• Update obographs.py

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• Revert rename

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• Update struct.py

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• Update struct.py

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• Update struct.py

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• Merge branch 'main' into update-model

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• Update struct.py

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• Update database.py

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• Revert move

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Commits on Nov 20, 2024

• Merge branch 'main' into update-model

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• Merge branch 'main' into update-model

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• Update struct.py

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• Merge branch 'main' into update-model

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• Update struct.py

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• Merge branch 'main' into update-model

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• Update reference.py

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• Update struct.py

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• Merge branch 'main' into update-model

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• Update struct.py

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• Update struct.py

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• Merge branch 'main' into update-model

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• Renames

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  d70a4d8

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• More cleanup

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  b1b3bb5

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• Update obographs.py

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• Update identifier_utils.py

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• Refactor

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• Move

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• Update

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• Update reader_utils.py

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• Update test_struct.py

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