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Update hdfwriter to include full filepath in root key in resource doc, add uuid DirectoryProvider for dynamic filenames #987

Update hdfwriter to include full filepath in root key in resource doc, add uuid DirectoryProvider for dynamic filenames

Update hdfwriter to include full filepath in root key in resource doc, add uuid DirectoryProvider for dynamic filenames #987

Workflow file for this run

name: Code CI
on:
push:
pull_request:
jobs:
lint:
# pull requests are a duplicate of a branch push if within the same repo.
if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v3
- name: Install python packages
uses: ./.github/actions/install_requirements
with:
requirements_file: requirements-dev-3.x.txt
install_options: -e .[dev]
- name: Lint
run: tox -e pre-commit,mypy
test:
if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest"] # can add windows-latest, macos-latest
python: ["3.10", "3.11"]
install: ["-e .[dev]"]
# Make one version be non-editable to test both paths of version code
include:
- os: "ubuntu-latest"
python: "3.9"
install: ".[dev]"
runs-on: ${{ matrix.os }}
env:
# https://github.com/pytest-dev/pytest/issues/2042
PY_IGNORE_IMPORTMISMATCH: "1"
steps:
- name: Checkout
uses: actions/checkout@v3
with:
# Need this to get version number from last tag
fetch-depth: 0
- name: Install python packages
uses: ./.github/actions/install_requirements
with:
python_version: ${{ matrix.python }}
requirements_file: requirements-test-${{ matrix.os }}-${{ matrix.python }}.txt
install_options: ${{ matrix.install }}
- name: List dependency tree
run: pipdeptree
- name: Run tests
run: tox -e pytest
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3
with:
name: ${{ matrix.python }}/${{ matrix.os }}
files: cov.xml
dist:
if: github.event_name != 'pull_request' || github.event.pull_request.head.repo.full_name != github.repository
runs-on: "ubuntu-latest"
steps:
- name: Checkout
uses: actions/checkout@v3
with:
# Need this to get version number from last tag
fetch-depth: 0
- name: Build sdist and wheel
run: |
export SOURCE_DATE_EPOCH=$(git log -1 --pretty=%ct) && \
pipx run build
- name: Upload sdist and wheel as artifacts
uses: actions/upload-artifact@v3
with:
name: dist
path: dist
- name: Check for packaging errors
run: pipx run twine check --strict dist/*
- name: Install python packages
uses: ./.github/actions/install_requirements
with:
python_version: "3.11"
requirements_file: requirements.txt
install_options: dist/*.whl
- name: Test module --version works using the installed wheel
# If more than one module in src/ replace with module name to test
run: python -m $(ls src | head -1) --version
release:
# upload to PyPI and make a release on every tag
needs: [lint, dist, test]
if: ${{ github.event_name == 'push' && startsWith(github.ref, 'refs/tags') }}
runs-on: ubuntu-latest
permissions:
id-token: write
contents: write
env:
HAS_PYPI_TOKEN: ${{ secrets.PYPI_TOKEN != '' }}
steps:
- uses: actions/download-artifact@v3
- name: Fixup blank lockfiles
# Github release artifacts can't be blank
run: for f in lockfiles/*; do [ -s $f ] || echo '# No requirements' >> $f; done
- name: Github Release
# We pin to the SHA, not the tag, for security reasons.
# https://docs.github.com/en/actions/learn-github-actions/security-hardening-for-github-actions#using-third-party-actions
uses: softprops/action-gh-release@1e07f4398721186383de40550babbdf2b84acfc5 # v0.1.14
with:
prerelease: ${{ contains(github.ref_name, 'a') || contains(github.ref_name, 'b') || contains(github.ref_name, 'rc') }}
files: |
dist/*
lockfiles/*
generate_release_notes: true
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
- name: Publish wheels to PyPI
uses: pypa/gh-action-pypi-publish@release/v1
with:
packages-dir: ./dist/