#Bocinsky et al. 2016

###February 14, 2016

This directory contains code written in R for all analyses reported in

R. Kyle Bocinsky, Johnathan Rush, Keith W. Kintigh, and Timothy A. Kohler In press. Exploration and Exploitation in the Macrohistory of the Prehispanic Pueblo Southwest. Science Advances.

####Data file S1

There are three primary files:

Bocinsky_ET_AL_2016_PRISM_EXTRACTOR ~ a tool for extracting a study area from the 800-m LT81 PRISM dataset, and calculating annually-resolved climate summaries

Bocinsky_ET_AL_2016_PaleoCAR ~ a tool for running the PaleoCAR paleoclimate reconstruction method

Bocinsky_ET_AL_2016_ANALYSIS ~ the primary script analyzing the output and generating all statistics and figures discussed in the paper and Supplementary Materials and Methods.

Each script contains instructions for setting up a working directory. THE FIRST THING YOU SHOULD DO IS CHANGE THE WORKING DIRECTORY IN EACH SCRIPT TO THE ACCOMPANYING DIRECTORY, "R".

WARNING: Running all of this will take a long time and substantial computing resources. You should do it anyway, though, to replicate our results and tweak our parameters to your specifications.

If you have questions, email Kyle Bocinsky (bocinsky@wsu.edu).