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Vascular atlas (regional and voxel based)

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@braincharter braincharter released this 19 Jul 11:36
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Atlas_v1.0
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Figure_before_after_algorithm (Medium)

In TEMPLATE_MNI_2018 folders, it contains, for SWI and ToF:

  • mean_data_VED.nii.gz: The output of the extraction itself, unthresholded, averaged across all subjects
  • mean_data_VED_thresh.nii.gz: The output of the extraction itself, thresholded, averaged across all subjects
  • CAT_data_VED.nii.gz: The output of the extraction itself, unthresholded, where all subjects are concatenated in a 4D file
  • CAT_data_VED_thresh.nii.gz: The output of the extraction itself, thresholded, where all subjects are concatenated in a 4D file

Figure_atlas_per_regions _of_the_brain

In REGIONAL_ATLAS_VASCULATURE_41, using functional (MSDL, BASC064) and anatomical (freesurfer, Harvard-Oxford) atlases, the folder contains, for SWI and ToF:

  • mean_template_data_VED.nii.gz: The output of the extraction itself, unthresholded, averaged across all subjects and across regions (3D file)
  • CAT_template_data_VED.nii.gz: The output of the extraction itself, unthresholded and averaged across region, where all subjects are concatenated in a 4D file
  • Png of the labels
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