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small bug fixes and new flag to support per-sample parallelization.

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@brentp brentp released this 19 Sep 23:11
· 71 commits to master since this release

v0.0.4

  • small bug-fixes
  • duphold now uses about half as much memory
  • add -d/--drop flag which will drop all samples from a VCF except the
    one matching the sample in --bam. this simplifies per-sample
    parallelization followed by (bcftools) merge.

An impending release of smoove will support parallelization of duphold calls for multiple sample bams.