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drop DHD in favor of DHFFC (flank-fold-change)

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@brentp brentp released this 15 Oct 15:57
· 45 commits to master since this release

v0.0.9

  • drop DHD in favor of DHFFC for (F)lank fold change.
  • make changes to support long, single-end reads.
  • fix bug in hts-nim that made duphold grab the wrong sample info from a SNP BCF (not vcf)