performance

Full Changelog: v0.1.5...v0.1.6

improve performance with much help from @khvzak
this release is about 7x faster than previous release due to optimizing how the lua expressions are evaluated.

It also will output the reference base if --fasta is specified.

ref_base and option to stop double-counting mates

Full Changelog: v0.1.4...v0.1.5

pile expressions and exclude regions

v0.1.4

docs

allow setting max-depth

v0.1.3

add max-depth arg

clap command-line parsing

v0.1.2

clap

performance

This changes how lua is called to improve performance by about 2x.

initial release

v0.1.0

output text