v3.1.11

Major change

For MixSIAR to remain on CRAN, I had to remove the mixsiar_gui() function. mixsiar_gui() will now be found in the new GitHub-only package MixSIARgui.

devtools::install_github("brianstock/MixSIARgui", dependencies=T) # installs MixSIAR as dependency
library(MixSIARgui) # also loads MixSIAR
mixsiar_gui()

Minor improvements

• New website for documentation: http://brianstock.github.io/MixSIAR/
• Allow output_JAGS() to suppress diagnostic pdf plots with output_options$diag_save_ggmcmc = FALSE (Thanks Virginia! #219)
• Allow plot_data() to return the ggplot object so that it can be modified by the user (Thanks Eric! #220, #222)
• 2 tweaks to make it clearer which sources receive which weights when using an informative prior
  • source names appear in plots from plot_prior() function
  • warning message that asks users to confirm the informative prior matches their alpha vector
• Update/fix alligator ex
  • moved calc_eps() (#149)
  • add code to plot cont effect + random effects of individuals (mixsiar_script_alligator_length_ind.R, #180)

Bug fix

• Fix error when combining sources with > 9 sources (Thanks Eric! 4e06aea)