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DropSeq.utilities R package

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Actually render body for email_outputs tearsheets (#490)
DropSeq.utilities R package #105: Commit 57617bb pushed by kshakir
February 8, 2025 06:20 47s master
February 8, 2025 06:20 47s
First version of dropseq_terra_utils with an email_outputs (#489)
DropSeq.utilities R package #104: Commit 8cd5916 pushed by kshakir
February 7, 2025 19:40 47s master
February 7, 2025 19:40 47s
New CLP to trim homopolymer starting sequence
DropSeq.utilities R package #103: Commit 9c6d273 pushed by alecw
January 21, 2025 14:42 51s master
January 21, 2025 14:42 51s
Jn compare bam tag values (#487)
DropSeq.utilities R package #102: Commit bf3086b pushed by jamesnemesh
January 15, 2025 00:22 50s master
January 15, 2025 00:22 50s
Explicitly mark optional argument collections as optional (#483)
DropSeq.utilities R package #101: Commit 32cf96a pushed by kshakir
November 2, 2024 17:04 48s master
November 2, 2024 17:04 48s
unit test for column type conflict (#482)
DropSeq.utilities R package #100: Commit 23712bc pushed by alecw
October 29, 2024 13:08 51s master
October 29, 2024 13:08 51s
Handle discordant column types due to some files having missing value…
DropSeq.utilities R package #99: Commit e2b92e1 pushed by alecw
October 28, 2024 21:17 53s master
October 28, 2024 21:17 53s
For optimus count the num_transcripts instead of using molecules (#480)
DropSeq.utilities R package #98: Commit fa16764 pushed by kshakir
October 25, 2024 22:07 48s master
October 25, 2024 22:07 48s
Handling missing values in mapping file when creating metacells (#479)
DropSeq.utilities R package #97: Commit cc77d3a pushed by alecw
October 23, 2024 19:58 50s master
October 23, 2024 19:58 50s
Script to concatenate TSVs
DropSeq.utilities R package #96: Commit 02f6e1b pushed by alecw
October 23, 2024 15:05 56s master
October 23, 2024 15:05 56s
Fix for edge case bug where multiple reads are summarized as a single…
DropSeq.utilities R package #95: Commit aa5b923 pushed by jamesnemesh
October 23, 2024 03:08 50s master
October 23, 2024 03:08 50s
Fix MANIFEST doc (#476)
DropSeq.utilities R package #94: Commit 1b08f25 pushed by alecw
October 22, 2024 20:32 48s master
October 22, 2024 20:32 48s
Sync environment.yml and pyproject.toml (#475)
DropSeq.utilities R package #93: Commit 825b982 pushed by kshakir
October 21, 2024 13:34 56s master
October 21, 2024 13:34 56s
eliminate subparser in dropseq_aggregation clp (#474)
DropSeq.utilities R package #92: Commit 277d7b7 pushed by alecw
October 17, 2024 19:40 49s master
October 17, 2024 19:40 49s
rename package (#473)
DropSeq.utilities R package #91: Commit 5ad8d58 pushed by alecw
October 17, 2024 19:09 50s master
October 17, 2024 19:09 50s
Handle booleans (#472)
DropSeq.utilities R package #90: Commit 8af26a7 pushed by alecw
October 17, 2024 17:40 53s master
October 17, 2024 17:40 53s
Require unique values for join column in secondary file to be joined …
DropSeq.utilities R package #89: Commit 1a852c0 pushed by alecw
October 17, 2024 13:53 50s master
October 17, 2024 13:53 50s
Script to join and filter metadata TSVs (#470)
DropSeq.utilities R package #88: Commit 6a79f20 pushed by alecw
October 16, 2024 21:02 52s master
October 16, 2024 21:02 52s
Move python package so that repo can support multiple python packages…
DropSeq.utilities R package #87: Commit 0a6096a pushed by alecw
October 15, 2024 16:06 50s master
October 15, 2024 16:06 50s
Fix to donor assignment plotting when there's only a single donor det…
DropSeq.utilities R package #86: Commit 3451722 pushed by jamesnemesh
October 11, 2024 15:38 50s master
October 11, 2024 15:38 50s
Enable tools such as FilterBamByTag to read large files from gs:// (#…
DropSeq.utilities R package #85: Commit 4253d90 pushed by kshakir
October 10, 2024 15:25 54s master
October 10, 2024 15:25 54s
Add ability to get CBCs from a possibly multi-column file with a head…
DropSeq.utilities R package #84: Commit d95320a pushed by alecw
October 9, 2024 20:14 54s master
October 9, 2024 20:14 54s
Round optimus_h5ad_to_dropseq pct metrics (#465)
DropSeq.utilities R package #83: Commit d7ce1ba pushed by kshakir
October 7, 2024 01:57 49s master
October 7, 2024 01:57 49s
Enable faster h5ad to mtx in renamed optimus_h5ad_to_dropseq (#462)
DropSeq.utilities R package #82: Commit 61ffb08 pushed by kshakir
October 5, 2024 23:59 55s master
October 5, 2024 23:59 55s
New program MakeMetacellsFromTripletDge (#464)
DropSeq.utilities R package #81: Commit 8e4b6ec pushed by alecw
October 3, 2024 19:05 51s master
October 3, 2024 19:05 51s