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bugfix v2 for clustered events in fix_mutect2
pyright-ratchet #505: Commit ede4869 pushed by gulatide
January 22, 2024 20:49 3m 9s fix-mutect2
January 22, 2024 20:49 3m 9s
bump up libcomplexity mem
pyright-ratchet #504: Commit ee2ad50 pushed by 5im1z
January 22, 2024 20:46 3m 5s add-wgs-cram-qc
January 22, 2024 20:46 3m 5s
add disks to wgsmetrics
pyright-ratchet #503: Commit 017b3bc pushed by 5im1z
January 22, 2024 19:40 3m 13s add-wgs-cram-qc
January 22, 2024 19:40 3m 13s
localize fai
pyright-ratchet #502: Commit fe07635 pushed by 5im1z
January 22, 2024 18:51 3m 6s add-wgs-cram-qc
January 22, 2024 18:51 3m 6s
add bootDiskSizeGb to wgsmetrics
pyright-ratchet #501: Commit c153594 pushed by 5im1z
January 22, 2024 18:33 3m 41s add-wgs-cram-qc
January 22, 2024 18:33 3m 41s
germline tag bugfix for fix_mutect2
pyright-ratchet #500: Commit 0e3b5cd pushed by gulatide
January 22, 2024 18:23 10m 8s fix-mutect2
January 22, 2024 18:23 10m 8s
update picard docker img for estimate complexity
pyright-ratchet #499: Commit 3130d36 pushed by 5im1z
January 22, 2024 17:00 3m 7s add-wgs-cram-qc
January 22, 2024 17:00 3m 7s
bump up mem allocation for CollectWgsMetrics
pyright-ratchet #498: Commit cb4781d pushed by 5im1z
January 22, 2024 16:41 3m 43s add-wgs-cram-qc
January 22, 2024 16:41 3m 43s
backslash!
pyright-ratchet #497: Commit a47c858 pushed by 5im1z
January 22, 2024 16:29 3m 9s add-wgs-cram-qc
January 22, 2024 16:29 3m 9s
reference fasta needed for libcomplex (bc cram)
pyright-ratchet #496: Commit 3b17887 pushed by 5im1z
January 22, 2024 16:23 4m 45s add-wgs-cram-qc
January 22, 2024 16:23 4m 45s
count file type
pyright-ratchet #495: Commit 55250b2 pushed by 5im1z
January 22, 2024 15:22 3m 41s add-wgs-cram-qc
January 22, 2024 15:22 3m 41s
rename variable
pyright-ratchet #494: Commit 6bdb5d8 pushed by 5im1z
January 22, 2024 15:20 3m 13s add-wgs-cram-qc
January 22, 2024 15:20 3m 13s
add back dependencies
pyright-ratchet #493: Commit fe2c0d8 pushed by 5im1z
January 22, 2024 15:00 3m 19s add-wgs-cram-qc
January 22, 2024 15:00 3m 19s
update samtools output type
pyright-ratchet #492: Commit f6e290b pushed by 5im1z
January 22, 2024 14:46 2m 58s add-wgs-cram-qc
January 22, 2024 14:46 2m 58s
update type
pyright-ratchet #491: Commit 024b146 pushed by 5im1z
January 22, 2024 14:44 3m 16s add-wgs-cram-qc
January 22, 2024 14:44 3m 16s
make sample-level
pyright-ratchet #490: Commit 99d5d83 pushed by 5im1z
January 22, 2024 14:42 3m 19s add-wgs-cram-qc
January 22, 2024 14:42 3m 19s
copy for wgs crams
pyright-ratchet #489: Commit 52e86f5 pushed by 5im1z
January 22, 2024 14:25 4m 3s add-wgs-cram-qc
January 22, 2024 14:25 4m 3s
add branch
pyright-ratchet #488: Commit 8d3b261 pushed by 5im1z
January 22, 2024 14:23 3m 30s add-wgs-cram-qc
January 22, 2024 14:23 3m 30s
Merge pull request #181 from qinqian/rna-renormalize
pyright-ratchet #487: Commit 49054d9 pushed by 5im1z
January 22, 2024 14:17 3m 34s master
January 22, 2024 14:17 3m 34s
no diff
pyright-ratchet #486: Commit 9fa7cce pushed by 5im1z
January 18, 2024 20:33 2m 32s add-wgs-cram-qc
January 18, 2024 20:33 2m 32s
Y instead of true
pyright-ratchet #485: Commit 437d54c pushed by 5im1z
January 18, 2024 18:08 3m 10s add-hotspot-col-to-maf
January 18, 2024 18:08 3m 10s
update column name
pyright-ratchet #484: Commit 3482ec2 pushed by 5im1z
January 17, 2024 16:55 3m 7s add-hotspot-col-to-maf
January 17, 2024 16:55 3m 7s
option to not upload sv and/or guide matrices
pyright-ratchet #483: Commit 1a17e7d pushed by 5im1z
January 17, 2024 15:05 7m 27s add-hotspot-col-to-maf
January 17, 2024 15:05 7m 27s
update hotspot matrix generation arg
pyright-ratchet #482: Commit 845f8ad pushed by 5im1z
January 12, 2024 20:47 3m 0s add-hotspot-col-to-maf
January 12, 2024 20:47 3m 0s
add to config
pyright-ratchet #481: Commit 1c1882f pushed by 5im1z
January 12, 2024 20:45 3m 14s add-hotspot-col-to-maf
January 12, 2024 20:45 3m 14s
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