localize fai

broadinstitute · Jan 22, 2024 · fe07635 · fe07635
1 parent c153594
commit fe07635
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/sandbox/wgs_qc/tasks/picard.wdl b/sandbox/wgs_qc/tasks/picard.wdl
@@ -1239,6 +1239,7 @@ task EstimateComplexity {
         File inputBam
         String metricsPath
         File referenceFasta="gs://genomics-public-data/resources/broad/hg38/v0/Homo_sapiens_assembly38.fasta"
+        File referenceFai="gs://genomics-public-data/resources/broad/hg38/v0/Homo_sapiens_assembly38.fasta.fai"
 
         Int javaXmxMb =  6656  # 6.5G
         String memoryMb = javaXmxMb + 512