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Fix HC OOB -- Assumed ploidy two in a dumb spot -- no calls were always diploid #6563

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merged 2 commits into from
Apr 22, 2020

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ldgauthier
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Fixes #6552

@droazen droazen self-assigned this Apr 22, 2020
@droazen droazen self-requested a review April 22, 2020 16:46
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One comment/question for you @ldgauthier

@droazen droazen assigned ldgauthier and unassigned droazen Apr 22, 2020
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👍 merge when tests pass @ldgauthier

@ldgauthier ldgauthier merged commit 3d088f1 into master Apr 22, 2020
@ldgauthier ldgauthier deleted the ldg_fixHaploidNoCallError branch April 22, 2020 20:19
jonn-smith pushed a commit that referenced this pull request Jul 14, 2020
…ys diploid (#6563)

* Assumed ploidy two in a dumb spot -- no calls were always diploid
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GATK 4.1.6.0 haplotypecaller ArrayIndexOutOfBoundsException
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