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fix to correctly handle space in sample name #6773

Merged
merged 2 commits into from
Aug 27, 2020
Merged

fix to correctly handle space in sample name #6773

merged 2 commits into from
Aug 27, 2020

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ahaessly
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@ahaessly ahaessly requested a review from meganshand August 27, 2020 13:17
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👍

@ahaessly ahaessly merged commit e2f02f1 into master Aug 27, 2020
@ahaessly ahaessly deleted the ah_mito_fixes branch August 27, 2020 14:38
@lbergelson
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Can we fix the sample names? This sort of nonesense always breaks everything.

@lbergelson
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I don't mean that this fix will break things, but stupid sample names will always cause OTHER problems in addition.

@droazen
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droazen commented Aug 27, 2020

Ah @lbergelson, always trying to fix the rest of the world instead of accepting the inevitability of problematic characters everywhere in genomics. Even we ourselves, who should know better, recently set up a new project with a period in its name, I've heard... :)

mwalker174 pushed a commit that referenced this pull request Nov 3, 2020
* update awk to split only on tabs to work around sample id with a space
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4 participants