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KM GVS documentation#7903

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RoriCremer merged 49 commits intoah_var_storebroadinstitute/gatk:ah_var_storefrom km-gvs-docsbroadinstitute/gatk:km-gvs-docsCopy head branch name to clipboardJun 29, 2022

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• Add GVS diagram

  

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• Create gvs-overview.md

  

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• clean up annotations table

  

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• Updated Quickstart table

  

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• Sample genomes > sample gVCF files

  

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• Created directory for beta docs

  

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• Simplifying tasks and tools

  

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• updated step 2

  

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• update tasks and tools

  

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• Update scripts/variantstore/beta_docs/gvs-overview.md

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• Simplified tasks and tools section

  

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• Updated input variable descriptions

  

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• Create run-your-own-samples.md

  

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• Moved diagram into beta_docs

  

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• updated run-your-own-samples.md

  

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• Update gvs-overview.md

  

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• Updated GVS docs

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• Replaced gVCF with GVCF

  

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• Added citation info to gvs-overview.md

  

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• Updated docs

  

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• Update gvs-overview.md

  

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• Updated docs

  

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• updated docs

  

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• Update gvs-quickstart.md

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• updated links

  

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• updated links

  

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• moved reference descriptions

  

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• updated links

  

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• add placeholders for cost

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• Add instructions to access interval lists

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• clean up GVS wdl explanation

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• remove cost info for now

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• update copyright

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• Update the workflow desc

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• keep all the descriptions consistent

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