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Callset statistics [VS-560] #8018

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merged 22 commits into from
Sep 27, 2022
Merged

Callset statistics [VS-560] #8018

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a158218
wip
mcovarr Sep 9, 2022
c79cb4a
oops
mcovarr Sep 9, 2022
6a7e215
wip
mcovarr Sep 9, 2022
f2a2054
wip
mcovarr Sep 9, 2022
0076010
more
mcovarr Sep 12, 2022
1565d3a
oops
mcovarr Sep 12, 2022
38e6ba4
try again
mcovarr Sep 13, 2022
61fa15d
maybe
mcovarr Sep 13, 2022
b00ef40
whoops
mcovarr Sep 13, 2022
eb84815
add chromosome to metrics
mcovarr Sep 13, 2022
7225b35
final testing
mcovarr Sep 13, 2022
7af5428
cleanup
mcovarr Sep 13, 2022
d93fa41
whoops
mcovarr Sep 14, 2022
3391eff
debug
mcovarr Sep 15, 2022
8f9f07b
fixes
mcovarr Sep 15, 2022
18505ea
PR feedback
mcovarr Sep 20, 2022
8b3db37
more
mcovarr Sep 20, 2022
5fa8503
expor
mcovarr Sep 22, 2022
1da1a2d
csv
mcovarr Sep 22, 2022
ae58faa
not sure what happened
mcovarr Sep 22, 2022
60598a3
oops
mcovarr Sep 22, 2022
0c53018
PR feedback, cleanup
mcovarr Sep 27, 2022
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10 changes: 9 additions & 1 deletion .dockstore.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -181,6 +181,7 @@ workflows:
branches:
- master
- ah_var_store
- vs_560_callset_stats
- name: GvsJointVariantCalling
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsJointVariantCalling.wdl
Expand Down Expand Up @@ -230,7 +231,14 @@ workflows:
branches:
- master
- ah_var_store
- vs_630_batched_avro_export
- name: GvsCallsetStatistics
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsCallsetStatistics.wdl
filters:
branches:
- master
- ah_var_store
- vs_560_callset_stats
- name: MitochondriaPipeline
subclass: WDL
primaryDescriptorPath: /scripts/mitochondria_m2_wdl/MitochondriaPipeline.wdl
Expand Down
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