CORE-69: Update commons-compress from 1.26.0 to 1.26.2 #2623
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| # Github action to Build Sam artifact, add/promote semantic tagging and then run tests | |
| name: Build, Publish to Sherlock, and Run Integration Tests | |
| on: | |
| pull_request: | |
| paths-ignore: ['**.md'] | |
| push: | |
| branches: | |
| - develop | |
| paths-ignore: ['**.md'] | |
| env: | |
| BEE_CREATE_RUN_NAME: 'bee-create-${{ github.event.repository.name }}-${{ github.run_id }}-${{ github.run_attempt }}' | |
| BEE_DESTROY_RUN_NAME: 'bee-destroy-${{ github.event.repository.name }}-${{ github.run_id }}-${{ github.run_attempt }}' | |
| RAWLS_SWAT_TESTS_RUN_NAME: 'rawls-swat-tests-${{ github.event.repository.name }}-${{ github.run_id }}-${{ github.run_attempt }}' | |
| jobs: | |
| tag: | |
| uses: ./.github/workflows/tag.yml | |
| with: | |
| release-branches: develop | |
| secrets: inherit | |
| extract-branch: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| branch-name: ${{ steps.extract-branch.outputs.branch-name }} | |
| steps: | |
| # we need this because github can't actually provide the branch name reliably | |
| # https://github.com/orgs/community/discussions/5251 | |
| - name: Extract branch | |
| id: extract-branch | |
| run: | | |
| if [[ '${{ github.event_name }}' == 'push' ]]; then | |
| BRANCH_NAME=${{ github.ref_name }} | |
| elif [[ '${{ github.event_name }}' == 'pull_request' ]]; then | |
| BRANCH_NAME=${{ github.head_ref }} | |
| else | |
| echo "Failed to extract branch information" | |
| exit 1 | |
| fi | |
| echo "branch-name=$BRANCH_NAME" >> $GITHUB_OUTPUT | |
| sam-build-tag-publish-job: | |
| runs-on: ubuntu-latest | |
| needs: [ tag, extract-branch ] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| outputs: | |
| custom-version-json: ${{ steps.render-sam-version.outputs.custom-version-json }} | |
| tag: ${{ needs.tag.outputs.tag }} | |
| steps: | |
| - uses: 'actions/checkout@v3' | |
| - name: debug outputs | |
| run: |- | |
| echo "github.ref ${{ github.ref }}" | |
| echo "github.ref_name ${{ github.ref_name }}" | |
| echo "GITHUB_REF_NAME ${GITHUB_REF_NAME}" | |
| echo "github.ref_type ${{ github.ref_type }}" | |
| echo "github.head_ref ${{ github.head_ref }}" | |
| echo "github ${{ github }}" | |
| # Builds Sam elsewhere to protect secrets. Upon success, will tag the commit in git. | |
| - name: dispatch build to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v3 | |
| with: | |
| workflow: sam-build | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| inputs: '{ "repository": "${{ github.event.repository.full_name }}", "ref": "${{ needs.extract-branch.outputs.branch-name }}", "sam-release-tag": "${{ needs.tag.outputs.tag }}" }' | |
| - name: Render Sam version | |
| id: render-sam-version | |
| env: | |
| GITHUB_CONTEXT: ${{ toJSON(github) }} | |
| run: | | |
| echo "$GITHUB_CONTEXT" | |
| echo 'custom-version-json={\"sam\":{\"appVersion\":\"${{ needs.tag.outputs.tag }}\"}}' >> $GITHUB_OUTPUT | |
| prepare-configs: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| log-results: ${{ steps.prepare-outputs.outputs.log-results }} | |
| test-context: ${{ steps.prepare-outputs.outputs.test-context }} | |
| steps: | |
| - id: prepare-outputs | |
| run: |- | |
| echo 'log-results=true' >> $GITHUB_OUTPUT | |
| if ${{ github.ref_name == 'develop' }}; then | |
| echo 'test-context=dev-merge' >> $GITHUB_OUTPUT | |
| else | |
| echo 'test-context=pr-test' >> $GITHUB_OUTPUT | |
| fi | |
| report-to-sherlock: | |
| # Report new Sam version to Broad DevOps | |
| uses: broadinstitute/sherlock/.github/workflows/client-report-app-version.yaml@main | |
| needs: [ sam-build-tag-publish-job ] | |
| with: | |
| new-version: ${{ needs.sam-build-tag-publish-job.outputs.tag }} | |
| chart-name: 'sam' | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| set-version-in-dev: | |
| # Put new Sam version in Broad dev environment | |
| uses: broadinstitute/sherlock/.github/workflows/client-set-environment-app-version.yaml@main | |
| needs: [ sam-build-tag-publish-job, report-to-sherlock ] | |
| if: ${{ github.ref_name == 'develop' }} | |
| with: | |
| new-version: ${{ needs.sam-build-tag-publish-job.outputs.tag }} | |
| chart-name: 'sam' | |
| environment-name: 'dev' | |
| secrets: | |
| sync-git-token: ${{ secrets.BROADBOT_TOKEN }} | |
| permissions: | |
| id-token: 'write' | |
| create-bee-workflow: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| runs-on: ubuntu-latest | |
| needs: [sam-build-tag-publish-job] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: Echo Sam version | |
| run: | | |
| echo '${{ needs.sam-build-tag-publish-job.outputs.custom-version-json }}' | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v4.0.0 | |
| with: | |
| run-name: "${{ env.BEE_CREATE_RUN_NAME }}-${{ matrix.terra-env }}" | |
| workflow: bee-create | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ | |
| "run-name": "${{ env.BEE_CREATE_RUN_NAME }}-${{ matrix.terra-env }}", | |
| "bee-name": "${{ github.event.repository.name }}-${{ github.run_id }}-${{ matrix.terra-env }}", | |
| "version-template": "${{ matrix.terra-env }}", | |
| "custom-version-json": "${{ needs.sam-build-tag-publish-job.outputs.custom-version-json }}" | |
| }' | |
| sam-smoke-test-job: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| testing-env: [ qa ] # what env resources to use, e.g. SA keys | |
| runs-on: ubuntu-latest | |
| needs: [create-bee-workflow] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v3 | |
| with: | |
| workflow: .github/workflows/sam-smoke-tests.yaml | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN }} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| # The smoke tests just need an access token for an enabled user on the Sam host that is being tested. | |
| inputs: '{ "sam-hostname": "sam.${{ github.event.repository.name }}-${{ github.run_id }}-${{ matrix.terra-env }}.bee.envs-terra.bio", "ENV": "${{ matrix.testing-env }}", "smoke-test-user-email": "firecloud-${{ matrix.testing-env }}@broad-dsde-${{ matrix.testing-env }}.iam.gserviceaccount.com" }' | |
| sam-swat-test-job: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| testing-env: [ qa ] # what env resources to use, e.g. SA keys | |
| runs-on: ubuntu-latest | |
| needs: [sam-smoke-test-job, prepare-configs, extract-branch] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v3 | |
| with: | |
| workflow: .github/workflows/sam-swat-tests.yaml | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ "bee-name": "${{ github.event.repository.name }}-${{ github.run_id }}-${{ matrix.terra-env }}", "ENV": "${{ matrix.testing-env }}", "log-results": "${{ needs.prepare-configs.outputs.log-results }}", "test-context": "${{ needs.prepare-configs.outputs.test-context }}", "caller_run_id": "${{ github.run_id }}", "ref": "${{ needs.extract-branch.outputs.branch-name }}" }' | |
| rawls-swat-test-job: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| testing-env: [ qa ] # what env resources to use, e.g. SA keys | |
| test-group: [ | |
| { group_name: workspaces, tag: "-n org.broadinstitute.dsde.test.api.BillingsTest -n org.broadinstitute.dsde.test.api.WorkspacesTest" }, | |
| { group_name: workspacesAuthDomains, tag: "-n org.broadinstitute.dsde.test.api.AuthDomainsTest" }, | |
| { group_name: workflows, tag: "-n org.broadinstitute.dsde.test.api.MethodsTest" } | |
| ] # Rawls test groups | |
| runs-on: ubuntu-latest | |
| needs: [sam-smoke-test-job, prepare-configs] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| env: | |
| rawls_base_test_entrypoint: "testOnly -- -l ProdTest -l NotebooksCanaryTest" | |
| test-context: ${{ needs.prepare-configs.outputs.test-context }} | |
| uses: broadinstitute/workflow-dispatch@v4 | |
| with: | |
| run-name: "${{ env.RAWLS_SWAT_TESTS_RUN_NAME }}-${{ matrix.terra-env }}-${{ matrix.testing-env }}-${{ matrix.test-group.group_name }}" | |
| workflow: .github/workflows/rawls-swat-tests.yaml | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN }} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ | |
| "additional-args": "{\"logging\":\"true\",\"java-version\":\"17\",\"billing-project\":\"\"}", | |
| "run-name": "${{ env.RAWLS_SWAT_TESTS_RUN_NAME }}-${{ matrix.terra-env }}-${{ matrix.testing-env }}-${{ matrix.test-group.group_name }}", | |
| "bee-name": "${{ github.event.repository.name }}-${{ github.run_id }}-${{ matrix.terra-env }}", | |
| "ENV": "${{ matrix.testing-env }}", | |
| "test-group-name": "${{ matrix.test-group.group_name }}", | |
| "test-command": "${{ env.rawls_base_test_entrypoint }} ${{ matrix.test-group.tag }}", | |
| "test-context": "${{ env.test-context }}" | |
| }' | |
| orch-swat-test-job: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| testing-env: [ qa ] # what env resources to use, e.g. SA keys | |
| runs-on: ubuntu-latest | |
| needs: [ sam-smoke-test-job, prepare-configs ] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v3 | |
| env: | |
| test-context: ${{ needs.prepare-configs.outputs.test-context }} | |
| with: | |
| workflow: .github/workflows/orch-swat-tests.yaml | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ | |
| "bee-name": "${{ github.event.repository.name }}-${{ github.run_id }}-${{ matrix.terra-env }}", | |
| "ENV": "${{ matrix.testing-env }}", | |
| "test-context": "${{ env.test-context }}" | |
| }' | |
| destroy-bee-workflow: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| runs-on: ubuntu-latest | |
| needs: [sam-swat-test-job, rawls-swat-test-job, orch-swat-test-job] | |
| if: always() # always run to confirm bee is destroyed | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v4.0.0 | |
| with: | |
| run-name: "${{ env.BEE_DESTROY_RUN_NAME }}-${{ matrix.terra-env }}" | |
| workflow: bee-destroy | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ | |
| "run-name": "${{ env.BEE_DESTROY_RUN_NAME }}-${{ matrix.terra-env }}", | |
| "bee-name": "${{ github.event.repository.name }}-${{ github.run_id }}-${{ matrix.terra-env }}" | |
| }' |