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v1.8.0
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@tomkinsc tomkinsc released this 19 Jul 14:45
· 1147 commits to master since this release
v1.8.0
0dc7ab2

New features:

  • reports.py plot_coverage — creates a coverage plot for a mapped .bam file. Multiple chart styles are supported, and data can be drawn as a line, filled line, or point series
  • reports.py align_and_plot_coverage — performs a quick BWA alignment between an unmapped bam file and a reference .fasta file, and then creates a coverage plot via reports.py plot_coverage.

Example chart:

coverage_plot

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