fix link #37
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| on: | |
| push: | |
| branches: | |
| - master | |
| - rc | |
| pull_request: | |
| branches: | |
| - master | |
| - development | |
| name: R-CMD-check | |
| # Increment this version when we want to clear cache | |
| env: | |
| cache-version: v1 | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: ubuntu-20.04, r: 'devel' } | |
| - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| - {os: ubuntu-20.04, r: 'oldrel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"} | |
| # need to manually set _R_CHECK_PACKAGE_NAME_ for R < ~3.4.4 | |
| # But we no longer test due to weird rspm failures, will test manually | |
| # Also, tests fail due to possible changes in Unicode tables. | |
| # - {os: ubuntu-20.04, r: '3.3', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest", rchkpkgname: "fansi"} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| RSPM: ${{ matrix.config.rspm }} | |
| # don't treat missing suggested packages as error | |
| _R_CHECK_FORCE_SUGGESTS_: false | |
| _R_CHECK_PACKAGE_NAME_: ${{ matrix.config.rchkpkgname }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2) | |
| shell: Rscript {0} | |
| - name: Cache R packages | |
| if: runner.os != 'Windows' | |
| uses: actions/cache@v1 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ env.cache-version }}-${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('depends.Rds') }} | |
| restore-keys: ${{ env.cache-version }}-${{ runner.os }}-r-${{ matrix.config.r }}- | |
| - name: Install system dependencies on Linux | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get install libcurl4-openssl-dev | |
| while read -r cmd | |
| do | |
| eval sudo $cmd | |
| done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | |
| - name: Install dependencies | |
| run: | | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| remotes::install_cran("covr") | |
| shell: Rscript {0} | |
| - name: Check | |
| run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |
| - name: Test coverage | |
| run: | | |
| options(covr.exclude_end="(?://|#)[[:space:]]*nocov[[:space:]]*end") | |
| options(covr.exclude_start="(?://|#)[[:space:]]*nocov[[:space:]]*start") | |
| options(covr.exclude_pattern="(?://|#)[[:space:]]*nocov") | |
| covr::codecov() | |
| shell: Rscript {0} |