Merge pull request #4092 from alisman/fixMut

Use alteration type enum to detect mutation profile
cBioPortal · Dec 16, 2021 · 0e468b1 · 0e468b1
2 parents 55d2301 + 537f902
commit 0e468b1
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Showing 2 changed files with 7 additions and 9 deletions.
diff --git a/src/pages/patientView/clinicalInformation/PatientViewPageStore.ts b/src/pages/patientView/clinicalInformation/PatientViewPageStore.ts
@@ -388,7 +388,8 @@ export class PatientViewPageStore {
         invoke: async () =>
             findMutationMolecularProfile(
                 this.molecularProfilesInStudy,
-                this.studyId
+                this.studyId,
+                AlterationTypeConstants.MUTATION_EXTENDED
             ),
     });
 

diff --git a/src/shared/lib/StoreUtils.ts b/src/shared/lib/StoreUtils.ts
@@ -1079,30 +1079,27 @@ export function isMutationProfile(profile: MolecularProfile): boolean {
 export function findMutationMolecularProfile(
     molecularProfilesInStudy: MobxPromise<MolecularProfile[]>,
     studyId: string,
-    suffix: string = MOLECULAR_PROFILE_MUTATIONS_SUFFIX
+    type: string
 ) {
     if (!molecularProfilesInStudy.result) {
         return undefined;
     }
 
-    const profile = molecularProfilesInStudy.result.find(
-        (p: MolecularProfile) => {
-            return p.molecularProfileId === `${studyId}${suffix}`;
-        }
+    const profile = molecularProfilesInStudy.result!.find(
+        (profile: MolecularProfile) => profile.molecularAlterationType === type
     );
 
     return profile;
 }
 
 export function findUncalledMutationMolecularProfileId(
     molecularProfilesInStudy: MobxPromise<MolecularProfile[]>,
-    studyId: string,
-    suffix: string = MOLECULAR_PROFILE_UNCALLED_MUTATIONS_SUFFIX
+    studyId: string
 ) {
     const profile = findMutationMolecularProfile(
         molecularProfilesInStudy,
         studyId,
-        suffix
+        AlterationTypeConstants.MUTATION_UNCALLED
     );
     if (profile) {
         return profile.molecularProfileId;