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Fix clinical data NA counts for multiple studies #10972

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onursumer
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@onursumer onursumer changed the title fix clinical data NA counts for multiple studies Fix clinical data NA counts for multiple studies Sep 3, 2024
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sonarcloud bot commented Sep 3, 2024

@alisman
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alisman commented Sep 9, 2024

@onursumer seems like filtering doesn't work though : (

When I filter on NA, I get no results. We could perhaps question whether filtering on NA is really an important user case.

fetch("http://localhost:8082/api/column-store/filtered-samples/fetch", {
"headers": {
"accept": "application/json",
"accept-language": "en-US,en;q=0.9",
"cache-control": "no-cache",
"content-type": "application/json",
"pragma": "no-cache",
"sec-ch-ua": ""Chromium";v="128", "Not;A=Brand";v="24", "Google Chrome";v="128"",
"sec-ch-ua-mobile": "?0",
"sec-ch-ua-platform": ""macOS"",
"sec-fetch-dest": "empty",
"sec-fetch-mode": "cors",
"sec-fetch-site": "same-origin"
},
"referrer": "http://localhost:8082/study/summary?id=acc_tcga_pan_can_atlas_2018%2Cmbc_genie_2020",
"referrerPolicy": "strict-origin-when-cross-origin",
"body": "{"clinicalDataFilters":[{"attributeId":"CANCER_TYPE","values":[{"value":"NA"}]}],"studyIds":["acc_tcga_pan_can_atlas_2018","mbc_genie_2020"],"alterationFilter":{"copyNumberAlterationEventTypes":{"AMP":true,"HOMDEL":true},"mutationEventTypes":{"any":true},"structuralVariants":null,"includeDriver":true,"includeVUS":true,"includeUnknownOncogenicity":true,"includeUnknownTier":true,"includeGermline":true,"includeSomatic":true,"includeUnknownStatus":true,"tiersBooleanMap":{}}}",
"method": "POST",
"mode": "cors",
"credentials": "include"
});

@alisman alisman closed this Sep 11, 2024
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2 participants