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bumping packages to same version as base image #8

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Merged
shaneknapp merged 1 commit into from
Dec 8, 2025
Merged

bumping packages to same version as base image #8

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2 changes: 2 additions & 0 deletions apt.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -66,3 +66,5 @@ xfce4-settings
xorg
xubuntu-icon-theme
tigervnc-standalone-server
libssl-dev

31 changes: 18 additions & 13 deletions environment.yml
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Expand Up @@ -7,28 +7,30 @@ channels:
dependencies:
# Items required for basic level functionality
- gh-scoped-creds==4.1
- git==2.49.0
- jupyter-resource-usage=1.1.0
- git==2.51.0
- ipython==9.7.0
- jupyter-resource-usage=1.2.0
- jupyterhub==5.3.0
- jupyterlab==4.4.3
- jupyterlab==4.5
- jupyter-archive==3.4.0
- jupyter_server==2.16.0
- jupyterlab-git==0.51.2
- jupyterlab_rise==0.43.1
- jupytext==1.16.6
- nbgitpuller==1.2.2
- notebook==7.4.3
- python==3.12.*
- notebook==7.5.0
- python==3.11.*
- pip==25.1.1

# vscode
- code-server==4.101.1
- jupyter-vscode-proxy==0.6
- code-server==4.106.2
- jupyter-vscode-proxy==0.7
- jupyter-server-proxy==4.4.0

# data science
- datascience==0.17.6
- datascience==0.18.1
- matplotlib==3.10.3
- numpy==2.3.0
- numpy==2.3.5
- geopandas==1.1.0
- openpyxl==3.1.5
- pandas==2.3.0
Expand All @@ -37,13 +39,16 @@ dependencies:
- scipy==1.15.2
- seaborn==0.13.2
- statsmodels==0.14.4
- sympy==1.14.0

# pip installed packages, conda is preferred
- pip:
# https://github.com/jupyter-java
# - jbang==0.7.0
- jupyterlab-a11y-checker==0.2.5
- jupyter-remote-desktop-proxy==3.0.1
# r2d installs jupyter-shiny-proxy, but in the base python env, not in the updated one
# useful for debugging python package issues
- pip-tree==4.0.0
- pipdeptree==2.28.0

- jupysql==0.10.15
- nbconvert[webpdf]==7.16.4
- nbconvert[webpdf]==7.16.6
- otter-grader==6.1.3