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Fusion flag

Keiran Raine edited this page Sep 8, 2016 · 1 revision

This table describes the meaning of the fusion flag values:

ID_FUSION_FLAG FUSION_FLAG
910 In frame fusion gene, 2 different genes, broken in coding exons. Same orientation. Reading frame preserved
900 In frame fusion gene, 2 different genes, broken in coding introns. Same orientation. Reading frame preserved
890 In frame fusion gene, same gene, broken in 2 different coding exons. Same orientation. Reading frame preserved
880 In frame fusion gene, same gene, broken in 2 different coding introns. Same orientation. Reading frame preserved
860 5UTR to 5UTR fusion, different genes. Same orientation
840 5UTR to 5UTR fusion, same gene. Same orientation
820 5UTR to coding fusion, 2 different genes. 1 break in 5UTR, 1 break in coding region. Same orientation. Ambiguous reading frame
800 5UTR to coding fusion, same gene. 1 break in 5UTR, 1 break in coding region. Same orientation. Ambiguous reading frame
780 Fusion, 2 different genes, broken in coding exons. Same orientation. Ambiguous reading frame
760 Fusion, same gene, broken in coding exons. Same orientation. Ambiguous reading frame
740 Fusion, 2 different genes, broken in ambiguous coding region. Same orientation. Ambiguous reading frame
720 Fusion, same gene, broken in ambiguous coding region. Same orientation. Ambiguous reading frame
715 Truncated protein product. Stop Codon formed at breakpoint junction
710 Out of frame fusion gene, 2 different genes, broken in coding exons. Same orientation. Reading frame different
700 Out of frame fusion gene, 2 different genes, broken in coding introns. Same orientation. Reading frame different
690 Out of frame fusion gene, same gene, broken in coding exons. Same orientation. Reading frame different
680 Out of frame fusion gene, same gene, broken in 2 different coding introns. Same orientation. Reading frame different
660 5UTR to 3UTR fusion, different genes. Same orientation
640 5UTR to 3UTR fusion, same gene. Same orientation
620 3UTR to coding fusion, 2 different genes. 1 break in 3UTR, 1 break in coding region. Same orientation. Ambiguous reading frame
600 3UTR to coding fusion, same gene. 1 break in 3UTR, 1 break in coding region. Same orientation. Ambiguous reading frame
580 fusion, 2 different genes. 1 break in 5UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame
570 fusion, same gene. 1 break in 5UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame
560 fusion, 2 different genes. 1 break in 3UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame
550 fusion, same gene. 1 break in 3UTR, 1 break in coding region. Opposite orientation. Ambiguous reading frame
540 fusion, 2 different genes, broken in coding introns. Opposite orientation. Ambiguous reading frame
530 fusion, same gene, broken in coding introns. Opposite orientation. Ambiguous reading frame
520 Fusion, 2 different genes, broken in coding exons. Opposite orientation. Ambiguous reading frame
510 Fusion, same gene, broken in coding exons. Opposite orientation. Ambiguous reading frame
500 Fusion, 2 different genes, broken in ambiguous coding region. Opposite orientation. Ambiguous reading frame
490 Fusion, same gene, broken in ambiguous coding region. Opposite orientation. Ambiguous reading frame
460 In frame fusion gene, same gene, broken in same coding intron. Same orientation. Reading frame unchanged
450 Fusion, same gene, broken in same coding intron. Different orientation. Ambiguous reading frame
440 3UTR to 5UTR fusion, different genes. Same orientation
420 3UTR to 5UTR fusion, same gene. Same orientation
400 3UTR to 3UTR fusion, different genes. Same orientation
380 3UTR to 3UTR fusion, same gene. Same orientation
360 5UTR to 5UTR fusion, different genes. Different orientation
350 5UTR to 5UTR fusion, same gene. Different orientation
320 5UTR to 3UTR fusion, different genes. Different orientation
310 5UTR to 3UTR fusion, same gene. Different orientation
280 3UTR to 5UTR fusion, different genes. Different orientation
270 3UTR to 5UTR fusion, same gene. Different orientation
240 3UTR to 3UTR fusion, different genes. Different orientation
230 3UTR to 3UTR fusion, same gene. Different orientation
200 Intron to something else fusion
180 Something else to intron fusion
100 Something else to something else fusion
0 No fusion
-1 unknown fusion
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