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STACAS v2.2.0

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@mass-a mass-a released this 18 Dec 14:46
· 7 commits to master since this release

New in this release:

  • Enable scale.data option for integration. It may be beneficial to scale the data if batch effects are very large, e.g. when integrating across species, or single cells with single nuclei
  • Include gene name conversion table for human genes
  • Add min.sample.size parameter to Run.STACAS()
  • Fix bug with NA in consistency scores when calculating anchors
  • In some datasets dash (-) is replaced by dot (.) in the gene names. Account for this in function for standardizing gene names
  • Improve compatibility with Seurat 5 assays