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✨ SA-based gate design and defect operational domain algorithms. #425

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✨ SA-based gate design and defect operational domain algorithms. #425

wants to merge 135 commits into from

Commits on Jan 24, 2024

  1. 🚧 WIP code.

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    Drewniok committed Jan 24, 2024
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Commits on Jan 31, 2024

  1. Merge branch 'main' into sa_gate_design

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  2. 🎨 add missing 2-input Boolean functions.

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  3. 🎨 small fix to allow initial parameter point.

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  4. 🎨 add runtime option for critical temperature simulation.

    @Drewniok
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  5. ✅ check to test the runtime.

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  6. 🎨 add runtime.

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  7. 🎨 small fixes.

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  8. 🎨 add missing includes.

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Commits on Feb 5, 2024

  1. 🚧 WIP code.

    @Drewniok
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  2. 🚧 WIP code.

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  3. 🚧 WIP code.

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  4. 🚧 WIP code.

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  5. 🚧 WIP code.

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Commits on Feb 6, 2024

  1. 🚧 WIP code.

    @Drewniok
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  2. 🚧 WIP code.

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  3. 🚧 WIP code.

    @Drewniok
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  4. 🎨 fix variable shadowing

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  5. 🚧 WIP code.

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  6. 🚧 reduce the number of used threads.

    @Drewniok
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  7. 🚧 increase the number of used threads.

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  8. 🚧 plot runtime to assess how fast the compute server is.

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  9. 🚧 set number of threads to 32.

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  10. 🚧 set number of threads to 16.

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  11. 🚧 set number of threads to 10.

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  12. 🚧 set number of threads to 1.

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  13. 🚧 smaller defect region.

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  14. 🚧 reduce canvas size

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  15. 🚧 increase the canvas.

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  16. 🚧 set new file name.

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  17. 🚧 without runtime.

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Commits on Feb 7, 2024

  1. 🎨 add missing headers.

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  2. 🎨 add new function to move defect.

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  3. 🚧 WIP code.

    @Drewniok
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  4. 🚧 bug fix.

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  5. 🚧 increase thread size.

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  6. 🚧 increase thread size.

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Commits on Feb 9, 2024

  1. 🚧 WIP code.

    @Drewniok
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  2. 🚧 use maximum number of threads.

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Commits on Feb 27, 2024

  1. Merge branch 'main' into sa_gate_design

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Commits on Mar 28, 2024

  1. Merge branch 'main' into sa_gate_design 

    # Conflicts:
#	include/fiction/algorithms/physical_design/design_sidb_gates.hpp
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Commits on Apr 26, 2024

  1. 🚧 WIP code.

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  2. Merge branch 'main' into sa_gate_design 

    # Conflicts:
#	cli/cmd/simulation/opdom.hpp
#	docs/algorithms/sidb_simulation.rst
#	include/fiction/algorithms/physical_design/design_sidb_gates.hpp
#	include/fiction/algorithms/simulation/sidb/assess_physical_population_stability.hpp
#	include/fiction/algorithms/simulation/sidb/critical_temperature.hpp
#	include/fiction/algorithms/simulation/sidb/is_operational.hpp
#	include/fiction/algorithms/simulation/sidb/maximum_defect_influence_position_and_distance.hpp
#	include/fiction/algorithms/simulation/sidb/operational_domain.hpp
#	include/fiction/types.hpp
#	test/algorithms/simulation/sidb/assess_physical_population_stability.cpp
#	test/algorithms/simulation/sidb/is_operational.cpp
#	test/algorithms/simulation/sidb/maximum_defect_influence_position_and_distance.cpp
#	test/algorithms/simulation/sidb/operational_domain.cpp
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  3. 🎨 All unit tests run successfully.

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  4. Merge branch 'cda-tum:main' into sa_gate_design

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  5. 🎨 small changes.

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  6. Merge remote-tracking branch 'origin/sa_gate_design' into sa_gate_design

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  7. 🎨 small changes.

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  8. 🎨 small changes.

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  9. 📝 update docu.

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  10. 🎨 small fix.

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Commits on Apr 29, 2024

  1. Merge branch 'main' into sa_gate_design

    @Drewniok
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  2. 📝 update docu.

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  3. 🔥 delete experiments.

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  4. 🔥 small fix.

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  5. 🎨 small fix.

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  6. 🎨 small fix.

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  7. 🎨 small fix.

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  8. 🎨 small fix.

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  9. Merge branch 'main' into sa_gate_design

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  10. 🎨 fix inconsistencies.

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  11. 🎨 Incorporated pre-commit fixes

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  12. 📝 fix bug in docu.

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  13. 🎨 add docu and small fixes.

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  14. 🎨 Incorporated pre-commit fixes

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  15. 🎨 renaming.

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  16. 🐍 update bindings.

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Commits on Apr 30, 2024

  1. Merge branch 'main' into sa_gate_design

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  2. 🎨 Incorporated pre-commit fixes

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  3. 🎨 add missing includes.

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  4. 🎨 restructure multithreading due to windows issue.

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Commits on May 1, 2024

  1. 🐍 fix bindings after changes.

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Commits on May 2, 2024

  1. 🐍 fix bindings after changes.

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  2. 🐍 implement CodeQL comments.

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  3. 🐍 small updates.

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  4. 📝 update docu.

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  5. 🎨 include missing headers.

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  6. 📝 small fix.

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Commits on May 3, 2024

  1. 🎨 small fixes.

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  2. 🎨 Rename function to better represent functionality.

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  3. 🎨 small fixes.

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Commits on May 6, 2024

  1. Merge branch 'main' into sa_gate_design 

    # Conflicts:
#	bindings/pyfiction/include/pyfiction/technology/sidb_lattice.hpp
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  2. 🎨 small fixes.

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  3. 🎨 Incorporated pre-commit fixes

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Commits on May 7, 2024

  1. 🐛 small bug fix.

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  2. 🎨 Incorporated pre-commit fixes

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  3. 🎨 small renaming due to previous merge.

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Commits on May 31, 2024

  1. Merge branch 'main' into sa_gate_design 

    # Conflicts:
#	bindings/pyfiction/include/pyfiction/algorithms/physical_design/design_sidb_gates.hpp
#	bindings/pyfiction/test/algorithms/physical_design/test_design_sidb_gates.py
#	include/fiction/algorithms/physical_design/design_sidb_gates.hpp
#	test/algorithms/physical_design/design_sidb_gates.cpp
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  2. 🎨 increase the sample size.

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  3. 🎨 Incorporated pre-commit fixes

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  4. 🐛 small error in unit test.

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Commits on Jun 3, 2024

  1. 🎨 minor changes.

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Commits on Jun 4, 2024

  1. 🚧 testing.

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  2. 🚧 small fixes.

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Commits on Jul 1, 2024

  1. 🎨 small fixes.

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  2. Merge branch 'main' into sa_gate_design

    @Drewniok
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  3. 💚 changes to fix code ql error.

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  4. 💚 changes to fix code ql error.

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  5. 💚 changes to fix code ql error.

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  6. 💚 disable mugen.

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Commits on Jul 2, 2024

  1. 🎨 update docstring.

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  2. 💚 small changes to test.

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  3. 💚 small changes to test.

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  4. 💚 small changes to test.

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Commits on Jul 3, 2024

  1. Merge branch 'main' into sa_gate_design

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  2. 🎨 rename function.

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  3. 🎨 Incorporated pre-commit fixes

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  4. 🎨 missing renaming in experiment.

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  5. Merge remote-tracking branch 'origin/sa_gate_design' into sa_gate_design

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  6. 💚 fix windows build issue.

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Commits on Jul 19, 2024

  1. Merge branch 'main' into sa_gate_design

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  2. 📝 Update pyfiction docstrings 

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Commits on Jul 22, 2024

  1. 📝 fix docu issue.

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  2. 🎨 Incorporated pre-commit fixes

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Commits on Jul 25, 2024

  1. Merge branch 'main' into sa_gate_design 

    # Conflicts:
#	bindings/pyfiction/include/pyfiction/algorithms/simulation/sidb/assess_physical_population_stability.hpp
#	bindings/pyfiction/include/pyfiction/pybind11_mkdoc_docstrings.hpp
#	docs/algorithms/sidb_simulation.rst
#	include/fiction/algorithms/simulation/sidb/assess_physical_population_stability.hpp
#	include/fiction/algorithms/simulation/sidb/operational_domain.hpp
#	test/utils/blueprints/layout_blueprints.hpp
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  2. 🎨 update code after merge.

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  3. 🎨 Incorporated pre-commit fixes

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  4. 📝 Update pyfiction docstrings 

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  5. 🎨 update code after merge.

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  6. 📝 Update pyfiction docstrings 

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  7. 📝 fix docu.

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  8. 🎨 Incorporated pre-commit fixes

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  9. 🎨 update the experiment script.

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  10. Merge remote-tracking branch 'origin/sa_gate_design' into sa_gate_design

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  11. 🎨 Incorporated pre-commit fixes

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  12. 🎨 small fix.

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  13. 📝 Update pyfiction docstrings 

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  14. 🎨 small fix.

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  15. 🎨 Incorporated pre-commit fixes

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  16. 📝 Update pyfiction docstrings 

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Commits on Aug 1, 2024

  1. Merge branch 'main' into sa_gate_design 

    # Conflicts:
#	test/algorithms/physical_design/design_sidb_gates.cpp
#	test/algorithms/simulation/sidb/assess_physical_population_stability.cpp
#	test/algorithms/simulation/sidb/critical_temperature.cpp
#	test/algorithms/simulation/sidb/maximum_defect_influence_position_and_distance.cpp
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  2. 🔀 merge.

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  3. 🎨 Incorporated pre-commit fixes

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  4. 🔀 merge.

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  5. Merge remote-tracking branch 'origin/sa_gate_design' into sa_gate_design

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