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@cidm-ph

Centre for Infectious Diseases and Microbiology - Public Health

Popular repositories Loading

  1. ggmapinset ggmapinset Public

    Add zoomed inset panels to your ggplot maps

    R 36

  2. ggautomap ggautomap Public

    Create ggplot maps from a column of place names

    R 25

  3. cartographer cartographer Public

    Turn place names into map data

    R 3

  4. STECode STECode Public

    Virulence barcoding for STEC

    Python 1

  5. obsim obsim Public

    Outbreak simulation based on a branching process

    Rust 1

  6. HiRes HiRes Public

    Pipeline to assess resistance markers in Haemophilus influenzae for betalactamases, cephalosporins and fluoroquinolones

    Python

Repositories

Showing 10 of 10 repositories
  • ggmapinset Public

    Add zoomed inset panels to your ggplot maps

    cidm-ph/ggmapinset’s past year of commit activity
    R 36 0 3 0 Updated Dec 18, 2024
  • nswgeo Public

    Geospatial data and maps for New South Wales, Australia

    cidm-ph/nswgeo’s past year of commit activity
    R 0 1 1 0 Updated Dec 17, 2024
  • HiRes Public

    Pipeline to assess resistance markers in Haemophilus influenzae for betalactamases, cephalosporins and fluoroquinolones

    cidm-ph/HiRes’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 9, 2024
  • STECode Public

    Virulence barcoding for STEC

    cidm-ph/STECode’s past year of commit activity
    Python 1 GPL-3.0 0 0 0 Updated Dec 2, 2024
  • distmat Public

    Distance matrix data types and file formats for Rust

    cidm-ph/distmat’s past year of commit activity
    Rust 0 Apache-2.0 0 0 1 Updated Nov 11, 2024
  • obsim Public

    Outbreak simulation based on a branching process

    cidm-ph/obsim’s past year of commit activity
    Rust 1 Apache-2.0 0 0 1 Updated Nov 11, 2024
  • phylepic Public

    Epidemic curve + phylogenomic tree

    cidm-ph/phylepic’s past year of commit activity
    R 0 0 0 0 Updated Oct 4, 2024
  • cidm-ph.r-universe.dev Public
    cidm-ph/cidm-ph.r-universe.dev’s past year of commit activity
    0 0 0 0 Updated Apr 2, 2024
  • cartographer Public

    Turn place names into map data

    cidm-ph/cartographer’s past year of commit activity
    R 3 0 1 0 Updated Jan 28, 2024
  • ggautomap Public

    Create ggplot maps from a column of place names

    cidm-ph/ggautomap’s past year of commit activity
    R 25 0 1 2 Updated Jan 16, 2024

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