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Things to add to Dockerfile #1

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4 of 6 tasks
rjleveque opened this issue Jan 23, 2017 · 5 comments
Open
4 of 6 tasks

Things to add to Dockerfile #1

rjleveque opened this issue Jan 23, 2017 · 5 comments

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@rjleveque
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rjleveque commented Jan 23, 2017

Several things were suggested in clawpack/doc#141, but not yet implemented. I'd be happy for some help from someone who knows Docker better than I do for the best way to install some of these...

  • vim
  • lapack
  • plotly
  • six
  • hdf5
  • h5py
@rjleveque
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I added vim and plotly in #2.

It seems that six and h5py were already installed as part of the conda distribution, maybe someone can check if this means hdf5 is fully functional as well?

I would think lapack is installed for numpy, but haven't looked into this yet.

@ketch
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ketch commented Jan 29, 2017

To check hdf5, just try to

import clawpack.pyclaw.io.hdf5

(or run the pyclaw tests)

@mandli
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mandli commented Jan 29, 2017

hdf5 and h5py works for me on import.

The PyClaw tests all work save for the known issue with examples.euler_3d.Sedov.

@mandli
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mandli commented Jan 29, 2017

I just installed lapack-dev via

apt-get install liblapack-dev

to the docker image and the multi-layer test now passes. Should I do a PR for this and finish up the above list?

@mandli
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mandli commented Jan 29, 2017

Oh, I forgot to actually test plotly, unchecking.

rjleveque added a commit that referenced this issue Jan 4, 2020
try updating 5.6.1 dockerfiles
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