Merge pull request NOAA-EMC#117 from climbfuji/update_gsl_develop_fro…

…m_develop_20211116

Update gsl/develop from develop 202/11/17

CMakeLists.txt

@@ -60,6 +60,10 @@ set_target_properties(fv3atm PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT
 target_include_directories(fv3atm INTERFACE $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
                                             $<INSTALL_INTERFACE:mod>)
 
+if(MULTI_GASES)
+  list(APPEND _fv3atm_defs_private MULTI_GASES)
+endif()
+
 target_link_libraries(fv3atm PUBLIC fv3
                                     fv3ccpp
                                     stochastic_physics

atmos_model.F90

@@ -686,7 +686,7 @@ subroutine atmos_model_init (Atmos, Time_init, Time, Time_step)
                               GFS_data%IntDiag, Init_parm, GFS_Diag)
    call FV3GFS_restart_read (GFS_data, GFS_restart_var, Atm_block, GFS_control, Atmos%domain, Atm(mygrid)%flagstruct%warm_start)
    if(GFS_control%do_ca .and. Atm(mygrid)%flagstruct%warm_start)then
-      call read_ca_restart (Atmos%domain,GFS_control%scells,GFS_control%nca,GFS_control%ncells_g,GFS_control%nca_g)
+      call read_ca_restart (Atmos%domain,GFS_control%ncells,GFS_control%nca,GFS_control%ncells_g,GFS_control%nca_g)
    endif
    ! Populate the GFS_data%Statein container with the prognostic state
    ! in Atm_block, which contains the initial conditions/restart data.

ccpp/CMakeLists.txt

@@ -89,6 +89,9 @@ if(MULTI_GASES)
   add_definitions(-DMULTI_GASES)
 endif()
 
+if(IDEA_PHYS)
+  add_definitions(-DIDEA_PHYS)
+endif()
 #------------------------------------------------------------------------------
 # Build CCPP framework and physics
 
@@ -102,10 +105,6 @@ add_subdirectory(physics)
 add_library(
     fv3ccpp
 
-    data/CCPP_typedefs.F90
-    data/GFS_typedefs.F90
-    data/CCPP_data.F90
-
     driver/GFS_diagnostics.F90
     driver/GFS_restart.F90
     driver/GFS_init.F90

ccpp/config/ccpp_prebuild_config.py

@@ -180,8 +180,6 @@
     'physics/physics/sfc_cice.f',
     'physics/physics/sfc_diff.f',
     'physics/physics/sfc_drv.f',
-    'physics/physics/sfc_noah_wrfv4_interstitial.F90',
-    'physics/physics/sfc_noah_wrfv4.F90',
     'physics/physics/sfc_noahmp_drv.F90',
     'physics/physics/flake_driver.F90',
     'physics/physics/sfc_nst.f',
@@ -238,86 +236,6 @@
 # Directory where the suite definition files are stored
 SUITES_DIR = 'suites'
 
-# Optional arguments - only required for schemes that use
-# optional arguments. ccpp_prebuild.py will throw an exception
-# if it encounters a scheme subroutine with optional arguments
-# if no entry is made here. Possible values are: 'all', 'none',
-# or a list of standard_names: [ 'var1', 'var3' ].
-OPTIONAL_ARGUMENTS = {
-    'rrtmg_sw' : {
-        'rrtmg_sw_run' : [
-            'tendency_of_air_temperature_due_to_shortwave_heating_assuming_clear_sky_on_radiation_time_step_and_radiation_levels',
-            'components_of_surface_downward_shortwave_fluxes',
-            'cloud_liquid_water_path',
-            'mean_effective_radius_for_liquid_cloud',
-            'cloud_ice_water_path',
-            'mean_effective_radius_for_ice_cloud',
-            'cloud_rain_water_path',
-            'mean_effective_radius_for_rain_drop',
-            'cloud_snow_water_path',
-            'mean_effective_radius_for_snow_flake',
-            ],
-        },
-    'rrtmg_lw' : {
-        'rrtmg_lw_run' : [
-            'tendency_of_air_temperature_due_to_longwave_heating_assuming_clear_sky_on_radiation_time_step_and_radiation_levels',
-            'cloud_liquid_water_path',
-            'mean_effective_radius_for_liquid_cloud',
-            'cloud_ice_water_path',
-            'mean_effective_radius_for_ice_cloud',
-            'cloud_rain_water_path',
-            'mean_effective_radius_for_rain_drop',
-            'cloud_snow_water_path',
-            'mean_effective_radius_for_snow_flake',
-            ],
-        },
-    'mp_thompson' : {
-        'mp_thompson_init' : [
-            'mass_number_concentration_of_cloud_liquid_water_particles_in_air',
-            'mass_number_concentration_of_hygroscopic_aerosols',
-            'mass_number_concentration_of_nonhygroscopic_ice_nucleating_aerosols',
-            'tendency_of_hygroscopic_aerosols_at_surface_adjacent_layer',
-            'tendency_of_nonhygroscopic_ice_nucleating_aerosols_at_surface_adjacent_layer',
-            # DH* 2020-06-01: turn off calculation of effective radii, now done in GFS_rrtmg_pre
-            #'effective_radius_of_stratiform_cloud_liquid_water_particle',
-            #'effective_radius_of_stratiform_cloud_ice_particle',
-            #'effective_radius_of_stratiform_cloud_snow_particle',
-            # *DH 2020-06-01
-            ],
-        'mp_thompson_run' : [
-            'mass_number_concentration_of_cloud_liquid_water_particles_in_air_of_new_state',
-            'mass_number_concentration_of_hygroscopic_aerosols_of_new_state',
-            'mass_number_concentration_of_nonhygroscopic_ice_nucleating_aerosols_of_new_state',
-            'tendency_of_hygroscopic_aerosols_at_surface_adjacent_layer',
-            'tendency_of_nonhygroscopic_ice_nucleating_aerosols_at_surface_adjacent_layer',
-            # DH* 2020-06-01: turn off calculation of effective radii, now done in GFS_rrtmg_pre
-            #'effective_radius_of_stratiform_cloud_liquid_water_particle',
-            #'effective_radius_of_stratiform_cloud_ice_particle',
-            #'effective_radius_of_stratiform_cloud_snow_particle',
-            # *DH 2020-06-01
-            ],
-        },
-    'rrtmgp_sw_rte' : {
-         'rrtmgp_sw_rte_run' : [
-             'components_of_surface_downward_shortwave_fluxes',
-             ],
-         },
-    'GFS_rrtmgp_sw_post' : {
-         'GFS_rrtmgp_sw_post_run' : [
-             'tendency_of_air_temperature_due_to_shortwave_heating_assuming_clear_sky_on_radiation_timestep',
-             'components_of_surface_downward_shortwave_fluxes',
-             ],
-         },
-    'GFS_rrtmgp_lw_post' : {
-         'GFS_rrtmgp_lw_post_run' : [
-             'tendency_of_air_temperature_due_to_longwave_heating_assuming_clear_sky_on_radiation_timestep',
-             ],
-         },
-    #'subroutine_name_1' : 'all',
-    #'subroutine_name_2' : 'none',
-    #'subroutine_name_2' : [ 'var1', 'var3'],
-    }
-
 # Directory where to write static API to
 STATIC_API_DIR = '{build_dir}/physics'
 STATIC_API_SRCFILE = '{build_dir}/physics/CCPP_STATIC_API.sh'