bugfix for parsing redo files with deviating SSBOND records

cmbi · Jul 26, 2019 · 261d642 · 261d642
1 parent e96274b
commit 261d642
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/src/structure.cpp b/src/structure.cpp
@@ -1158,15 +1158,21 @@ void MProtein::ReadPDB(std::istream& is, bool cAlphaOnly)
  {
  //SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.03
  std::pair<MResidueID,MResidueID> ssbond;
+
  ssbond.first.chain = line[15];
  ssbond.first.seqNumber = boost::lexical_cast<uint16>(
  ba::trim_copy(line.substr(16, 5)));
  ssbond.first.insertionCode = line[21];
+
  ssbond.second.chain = line[29];
  ssbond.second.seqNumber = boost::lexical_cast<uint16>(
  ba::trim_copy(line.substr(30, 5)));
  ssbond.second.insertionCode = line[35];
 
+ // (for parsing the REDO files)
+ if (line[35] == 0)
+ ssbond.second.insertionCode = " ";
+
  ssbonds.push_back(ssbond);
  continue;
  }