Popular repositories Loading

1. HiCAT HiCAT Public

   High precision, marker-based, hierarchical cell-type annotation tool for single-cell RNA-seq data

   Jupyter Notebook 6 2

2. RCTIcollection RCTIcollection Public

   An easy-to-use R wrapper function to run celltype identifiers for single-cell RNA-seq data

   Jupyter Notebook 3

3. StringFix StringFix Public

   An annotation-guided transcriptome assembler

   Python 2

4. MarkerCount MarkerCount Public

   MarkerCount is a python3 cell-type identification toolkit for single-cell RNA-Seq experiments.

   Jupyter Notebook 1 1

5. scoda_explorer scoda_explorer Public

   A visualization package to explore the SCODA results

   Jupyter Notebook 1

6. InferPloidy InferPloidy Public

   Ploidy inference from CNV estimates