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Computational Medicine Lab

Computational Medicine Group based in London (QMUL PHURI) and Berlin (BIH@Charité)

Computational Medicine Group

This is the GitHub organization of the Computational Medicine Group based in the QMUL PHURI (London) and the BIH@Charité (Berlin).

For recent results and studies please visit www.omicscience.org.

Popular repositories Loading

  1. sparse-proteomic-prediction-of-common-and-rare-diseases sparse-proteomic-prediction-of-common-and-rare-diseases Public

    This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI pending) The provided scripts are not designed to work out …

    R 13 5

  2. olink-fasting-study olink-fasting-study Public

    R 4

  3. gwascatftp gwascatftp Public

    Forked from cfbeuchel/gwascatftp

    R package to access GWAS Catalog FTP data

    R 3

  4. phecode-covid19-ukb phecode-covid19-ukb Public

    R 2

  5. phecode-gwas-ukb phecode-gwas-ukb Public

    R 1

  6. proteome-determinants-somalogic proteome-determinants-somalogic Public

    R 1

Repositories

Showing 10 of 12 repositories
  • project-template Public template

    A suggested directory and file structure for analysis projects in the computational medicine group

    comp-med/project-template’s past year of commit activity
    Shell 0 0 0 0 Updated Nov 7, 2024
  • nf-template Public template

    Template directory for Nextflow pipelines providing basic files and directories when setting up a new workflow

    comp-med/nf-template’s past year of commit activity
    Nextflow 0 0 0 0 Updated Oct 7, 2024
  • comp-med/proteome-determinants-somalogic’s past year of commit activity
    R 1 0 0 0 Updated Jul 11, 2024
  • sparse-proteomic-prediction-of-common-and-rare-diseases Public

    This repository contains code associated with the study "Proteomic signatures improve risk predictions for common and rare diseases" (DOI pending) The provided scripts are not designed to work out of the box, but rather illustrate the main steps done for each of the analysis performed.

    comp-med/sparse-proteomic-prediction-of-common-and-rare-diseases’s past year of commit activity
    R 13 5 1 0 Updated Jul 3, 2024
  • script-backup-utility Public

    Bash scripts to search and backup all files in specific directories with a specific extension.

    comp-med/script-backup-utility’s past year of commit activity
    Shell 0 0 0 0 Updated May 10, 2024
  • comp-med/phecode-covid19-ukb’s past year of commit activity
    R 2 0 0 0 Updated Apr 17, 2024
  • comp-med/phecode-gwas-ukb’s past year of commit activity
    R 1 0 0 0 Updated Mar 19, 2024
  • all-inclusive-r-apptainer Public

    Definition files for building an R container using radian and including various additional libraries for installing R packages.

    comp-med/all-inclusive-r-apptainer’s past year of commit activity
    Shell 0 0 0 0 Updated Feb 12, 2024
  • gwascatftp Public Forked from cfbeuchel/gwascatftp

    R package to access GWAS Catalog FTP data

    comp-med/gwascatftp’s past year of commit activity
    R 3 GPL-3.0 1 0 0 Updated Jan 29, 2024
  • comp-med/olink-fasting-study’s past year of commit activity
    R 4 GPL-3.0 0 0 0 Updated Jan 10, 2024

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