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combmatrix.panel.line.size not working #43

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jenellewallace opened this issue Jun 14, 2024 · 6 comments
Closed

combmatrix.panel.line.size not working #43

jenellewallace opened this issue Jun 14, 2024 · 6 comments

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@jenellewallace
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Hi, thanks so much for this package - I'm able to get what I need with it whereas I couldn't with upsetr and complexupset for various reasons. The only problem I'm having is that combmatrix.panel.line.size and combmatrix.panel.point.size are not working for me.
Example code:

ggplot(tidy_genes,aes(x=celltypes)) +
  geom_bar(fill = 'black') +
  scale_x_upset(order_by = "degree", sets = abbrs) +
  theme_combmatrix(combmatrix.panel.line.size = 0)

Result:
image

Changing either of these parameters seems to have no effect on the final plot (whether they are 0 or some other value). I installed the current version of the package with devtools. Thank you for any help you can give!
@const-ae
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Owner

That is suprising. If I set those two settings on an example plot, they work as expected:

library(tidyverse)
library(ggupset)
tidy_movies %>%
  distinct(title, year, length, .keep_all=TRUE) %>%
  ggplot(aes(x=Genres)) +
    geom_bar() +
    scale_x_upset(n_intersections = 20) +
    theme_combmatrix(combmatrix.panel.line.size = 0.1,
                     combmatrix.panel.point.size = 1)
#> Warning: Removed 100 rows containing non-finite outside the scale range
#> (`stat_count()`).

Created on 2024-06-15 with reprex v2.1.0

Session info 
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.3.2 (2023-10-31)
#>  os       macOS Sonoma 14.5
#>  system   x86_64, darwin20
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       Europe/Berlin
#>  date     2024-06-15
#>  pandoc   3.1.11 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/x86_64/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version    date (UTC) lib source
#>  cli           3.6.2      2023-12-11 [1] CRAN (R 4.3.0)
#>  colorspace    2.1-0      2023-01-23 [2] CRAN (R 4.3.0)
#>  curl          5.2.1      2024-03-01 [1] CRAN (R 4.3.2)
#>  digest        0.6.34     2024-01-11 [1] CRAN (R 4.3.0)
#>  dplyr       * 1.1.4      2023-11-17 [1] CRAN (R 4.3.0)
#>  evaluate      0.23       2023-11-01 [1] CRAN (R 4.3.0)
#>  fansi         1.0.6      2023-12-08 [1] CRAN (R 4.3.0)
#>  farver        2.1.1      2022-07-06 [2] CRAN (R 4.3.0)
#>  fastmap       1.1.1      2023-02-24 [2] CRAN (R 4.3.0)
#>  forcats     * 1.0.0      2023-01-29 [2] CRAN (R 4.3.0)
#>  fs            1.6.3      2023-07-20 [1] CRAN (R 4.3.0)
#>  generics      0.1.3      2022-07-05 [2] CRAN (R 4.3.0)
#>  ggplot2     * 3.5.0      2024-02-23 [1] CRAN (R 4.3.2)
#>  ggupset     * 0.3.0.9002 2023-08-16 [1] local
#>  glue          1.7.0      2024-01-09 [1] CRAN (R 4.3.0)
#>  gtable        0.3.4      2023-08-21 [1] CRAN (R 4.3.0)
#>  highr         0.10       2022-12-22 [2] CRAN (R 4.3.0)
#>  hms           1.1.3      2023-03-21 [2] CRAN (R 4.3.0)
#>  htmltools     0.5.7      2023-11-03 [1] CRAN (R 4.3.0)
#>  knitr         1.45       2023-10-30 [1] CRAN (R 4.3.0)
#>  labeling      0.4.3      2023-08-29 [1] CRAN (R 4.3.0)
#>  lifecycle     1.0.4      2023-11-07 [1] CRAN (R 4.3.0)
#>  lubridate   * 1.9.3      2023-09-27 [1] CRAN (R 4.3.0)
#>  magrittr      2.0.3      2022-03-30 [2] CRAN (R 4.3.0)
#>  munsell       0.5.0      2018-06-12 [2] CRAN (R 4.3.0)
#>  pillar        1.9.0      2023-03-22 [2] CRAN (R 4.3.0)
#>  pkgconfig     2.0.3      2019-09-22 [2] CRAN (R 4.3.0)
#>  purrr       * 1.0.2      2023-08-10 [1] CRAN (R 4.3.0)
#>  R.cache       0.16.0     2022-07-21 [2] CRAN (R 4.3.0)
#>  R.methodsS3   1.8.2      2022-06-13 [2] CRAN (R 4.3.0)
#>  R.oo          1.26.0     2024-01-24 [1] CRAN (R 4.3.2)
#>  R.utils       2.12.3     2023-11-18 [1] CRAN (R 4.3.0)
#>  R6            2.5.1      2021-08-19 [1] CRAN (R 4.3.0)
#>  readr       * 2.1.5      2024-01-10 [1] CRAN (R 4.3.0)
#>  reprex        2.1.0      2024-01-11 [1] CRAN (R 4.3.0)
#>  rlang         1.1.3      2024-01-10 [1] CRAN (R 4.3.0)
#>  rmarkdown     2.25       2023-09-18 [1] CRAN (R 4.3.0)
#>  rstudioapi    0.15.0     2023-07-07 [1] CRAN (R 4.3.0)
#>  scales        1.3.0      2023-11-28 [1] CRAN (R 4.3.0)
#>  sessioninfo   1.2.2      2021-12-06 [2] CRAN (R 4.3.0)
#>  stringi       1.8.3      2023-12-11 [1] CRAN (R 4.3.0)
#>  stringr     * 1.5.1      2023-11-14 [1] CRAN (R 4.3.0)
#>  styler        1.10.2     2023-08-29 [1] CRAN (R 4.3.0)
#>  tibble      * 3.2.1      2023-03-20 [2] CRAN (R 4.3.0)
#>  tidyr       * 1.3.1      2024-01-24 [1] CRAN (R 4.3.2)
#>  tidyselect    1.2.0      2022-10-10 [2] CRAN (R 4.3.0)
#>  tidyverse   * 2.0.0      2023-02-22 [2] CRAN (R 4.3.0)
#>  timechange    0.3.0      2024-01-18 [1] CRAN (R 4.3.0)
#>  tzdb          0.4.0      2023-05-12 [2] CRAN (R 4.3.0)
#>  utf8          1.2.4      2023-10-22 [1] CRAN (R 4.3.0)
#>  vctrs         0.6.5      2023-12-01 [1] CRAN (R 4.3.0)
#>  withr         3.0.0      2024-01-16 [1] CRAN (R 4.3.0)
#>  xfun          0.42       2024-02-08 [1] CRAN (R 4.3.2)
#>  xml2          1.3.6      2023-12-04 [1] CRAN (R 4.3.0)
#>  yaml          2.3.8      2023-12-11 [1] CRAN (R 4.3.0)
#> 
#>  [1] /Users/ahlmanne/Library/R/x86_64/4.3/library
#>  [2] /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

Can you check if my example works for you?

@const-ae
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Owner

Alternatively, I would recommend to use debugonce(ggupset:::make_combination_matrix_plot) to step through the creation of the axis and see where it goes wrong.

@jenellewallace
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Author

Hi thanks for the quick response! Your example does not work for me either - line width and point size still do not change. I tried in a new session of R without loading any other libraries. I tried debugging as you suggested - it looks like "theme" is not being passed correctly to make_combination_matrix_plot. When I check the value (at line 28 in the function), this is what I see:

Browse[1]> theme$combmatrix.panel.line.size 
[1] 1.2

Any ideas on where to go from here? Thanks for your help!

sessionInfo()
R version 4.4.0 (2024-04-24)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 20.04.6 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3;  LAPACK version 3.9.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

time zone: America/Los_Angeles
tzcode source: system (glibc)

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] ggupset_0.3.0.9002 lubridate_1.9.3    forcats_1.0.0      stringr_1.5.1      dplyr_1.1.4        purrr_1.0.2        readr_2.1.5        tidyr_1.3.1       
 [9] tibble_3.2.1       ggplot2_3.5.1      tidyverse_2.0.0   

loaded via a namespace (and not attached):
 [1] generics_0.1.3    utf8_1.2.4        stringi_1.8.4     hms_1.1.3         digest_0.6.35     magrittr_2.0.3    timechange_0.3.0  grid_4.4.0        pkgload_1.3.4    
[10] fastmap_1.2.0     processx_3.8.4    pkgbuild_1.4.4    sessioninfo_1.2.2 urlchecker_1.0.1  ps_1.7.6          promises_1.3.0    fansi_1.0.6       scales_1.3.0     
[19] cli_3.6.2         shiny_1.8.1.1     rlang_1.1.4       ellipsis_0.3.2    munsell_0.5.1     withr_3.0.0       remotes_2.5.0     cachem_1.1.0      devtools_2.4.5   
[28] tools_4.4.0       tzdb_0.4.0        memoise_2.0.1     colorspace_2.1-0  httpuv_1.6.15     curl_5.2.1        vctrs_0.6.5       R6_2.5.1          mime_0.12        
[37] lifecycle_1.0.4   fs_1.6.4          htmlwidgets_1.6.4 usethis_2.2.3     miniUI_0.1.1.1    pkgconfig_2.0.3   desc_1.4.3        callr_3.7.6       pillar_1.9.0     
[46] later_1.3.2       gtable_0.3.5      glue_1.7.0        profvis_0.3.8     Rcpp_1.0.12       tidyselect_1.2.1  rstudioapi_0.16.0 farver_2.1.2      xtable_1.8-4     
[55] htmltools_0.5.8.1 labeling_0.4.3    compiler_4.4.0

@const-ae
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Owner

const-ae commented Jun 18, 2024 •
edited
Loading

Thanks for going through the code and providing the detailed bug report. The reason for the problem seems to be some change in version 3.5.1 (vs 3.5.0) in ggplot:

This is ggplot2 v3.5.0:

library(tidyverse)
library(ggupset)
tidy_movies %>%
  distinct(title, year, length, .keep_all=TRUE) %>%
  ggplot(aes(x=Genres)) +
    geom_bar() +
    scale_x_upset(n_intersections = 20, order_by = "degree") +
    theme_combmatrix(combmatrix.panel.line.size = 0.1,
                     combmatrix.panel.point.size = 1)
#> Warning: Removed 1176 rows containing non-finite outside the scale range
#> (`stat_count()`).

Created on 2024-06-18 with reprex v2.1.0

Session info 
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.3.2 (2023-10-31)
#>  os       macOS Sonoma 14.5
#>  system   x86_64, darwin20
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       Europe/Berlin
#>  date     2024-06-18
#>  pandoc   3.1.11 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/x86_64/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version    date (UTC) lib source
#>  cli           3.6.2      2023-12-11 [1] CRAN (R 4.3.0)
#>  colorspace    2.1-0      2023-01-23 [2] CRAN (R 4.3.0)
#>  curl          5.2.1      2024-03-01 [1] CRAN (R 4.3.2)
#>  digest        0.6.34     2024-01-11 [1] CRAN (R 4.3.0)
#>  dplyr       * 1.1.4      2023-11-17 [1] CRAN (R 4.3.0)
#>  evaluate      0.23       2023-11-01 [1] CRAN (R 4.3.0)
#>  fansi         1.0.6      2023-12-08 [1] CRAN (R 4.3.0)
#>  farver        2.1.1      2022-07-06 [2] CRAN (R 4.3.0)
#>  fastmap       1.1.1      2023-02-24 [2] CRAN (R 4.3.0)
#>  forcats     * 1.0.0      2023-01-29 [2] CRAN (R 4.3.0)
#>  fs            1.6.3      2023-07-20 [1] CRAN (R 4.3.0)
#>  generics      0.1.3      2022-07-05 [2] CRAN (R 4.3.0)
#>  ggplot2     * 3.5.0      2024-06-18 [1] Github (tidyverse/ggplot2@a6f1a7c)
#>  ggupset     * 0.3.0.9002 2023-08-16 [1] local
#>  glue          1.7.0      2024-01-09 [1] CRAN (R 4.3.0)
#>  gtable        0.3.4      2023-08-21 [1] CRAN (R 4.3.0)
#>  highr         0.10       2022-12-22 [2] CRAN (R 4.3.0)
#>  hms           1.1.3      2023-03-21 [2] CRAN (R 4.3.0)
#>  htmltools     0.5.7      2023-11-03 [1] CRAN (R 4.3.0)
#>  knitr         1.45       2023-10-30 [1] CRAN (R 4.3.0)
#>  labeling      0.4.3      2023-08-29 [1] CRAN (R 4.3.0)
#>  lifecycle     1.0.4      2023-11-07 [1] CRAN (R 4.3.0)
#>  lubridate   * 1.9.3      2023-09-27 [1] CRAN (R 4.3.0)
#>  magrittr      2.0.3      2022-03-30 [2] CRAN (R 4.3.0)
#>  munsell       0.5.0      2018-06-12 [2] CRAN (R 4.3.0)
#>  pillar        1.9.0      2023-03-22 [2] CRAN (R 4.3.0)
#>  pkgconfig     2.0.3      2019-09-22 [2] CRAN (R 4.3.0)
#>  purrr       * 1.0.2      2023-08-10 [1] CRAN (R 4.3.0)
#>  R.cache       0.16.0     2022-07-21 [2] CRAN (R 4.3.0)
#>  R.methodsS3   1.8.2      2022-06-13 [2] CRAN (R 4.3.0)
#>  R.oo          1.26.0     2024-01-24 [1] CRAN (R 4.3.2)
#>  R.utils       2.12.3     2023-11-18 [1] CRAN (R 4.3.0)
#>  R6            2.5.1      2021-08-19 [1] CRAN (R 4.3.0)
#>  readr       * 2.1.5      2024-01-10 [1] CRAN (R 4.3.0)
#>  reprex        2.1.0      2024-01-11 [1] CRAN (R 4.3.0)
#>  rlang         1.1.3      2024-01-10 [1] CRAN (R 4.3.0)
#>  rmarkdown     2.25       2023-09-18 [1] CRAN (R 4.3.0)
#>  rstudioapi    0.15.0     2023-07-07 [1] CRAN (R 4.3.0)
#>  scales        1.3.0      2023-11-28 [1] CRAN (R 4.3.0)
#>  sessioninfo   1.2.2      2021-12-06 [2] CRAN (R 4.3.0)
#>  stringi       1.8.3      2023-12-11 [1] CRAN (R 4.3.0)
#>  stringr     * 1.5.1      2023-11-14 [1] CRAN (R 4.3.0)
#>  styler        1.10.2     2023-08-29 [1] CRAN (R 4.3.0)
#>  tibble      * 3.2.1      2023-03-20 [2] CRAN (R 4.3.0)
#>  tidyr       * 1.3.1      2024-01-24 [1] CRAN (R 4.3.2)
#>  tidyselect    1.2.0      2022-10-10 [2] CRAN (R 4.3.0)
#>  tidyverse   * 2.0.0      2023-02-22 [2] CRAN (R 4.3.0)
#>  timechange    0.3.0      2024-01-18 [1] CRAN (R 4.3.0)
#>  tzdb          0.4.0      2023-05-12 [2] CRAN (R 4.3.0)
#>  utf8          1.2.4      2023-10-22 [1] CRAN (R 4.3.0)
#>  vctrs         0.6.5      2023-12-01 [1] CRAN (R 4.3.0)
#>  withr         3.0.0      2024-01-16 [1] CRAN (R 4.3.0)
#>  xfun          0.42       2024-02-08 [1] CRAN (R 4.3.2)
#>  xml2          1.3.6      2023-12-04 [1] CRAN (R 4.3.0)
#>  yaml          2.3.8      2023-12-11 [1] CRAN (R 4.3.0)
#> 
#>  [1] /Users/ahlmanne/Library/R/x86_64/4.3/library
#>  [2] /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

And here is the output with 3.5.1:

library(tidyverse)
library(ggupset)
tidy_movies %>%
  distinct(title, year, length, .keep_all=TRUE) %>%
  ggplot(aes(x=Genres)) +
    geom_bar() +
    scale_x_upset(n_intersections = 20, order_by = "degree") +
    theme_combmatrix(combmatrix.panel.line.size = 0.1,
                     combmatrix.panel.point.size = 1)
#> Warning: Removed 1176 rows containing non-finite outside the scale range
#> (`stat_count()`).

Created on 2024-06-18 with reprex v2.1.0

Session info 
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.3.2 (2023-10-31)
#>  os       macOS Sonoma 14.5
#>  system   x86_64, darwin20
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       Europe/Berlin
#>  date     2024-06-18
#>  pandoc   3.1.11 @ /Applications/RStudio.app/Contents/Resources/app/quarto/bin/tools/x86_64/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version    date (UTC) lib source
#>  cli           3.6.2      2023-12-11 [1] CRAN (R 4.3.0)
#>  colorspace    2.1-0      2023-01-23 [2] CRAN (R 4.3.0)
#>  curl          5.2.1      2024-03-01 [1] CRAN (R 4.3.2)
#>  digest        0.6.34     2024-01-11 [1] CRAN (R 4.3.0)
#>  dplyr       * 1.1.4      2023-11-17 [1] CRAN (R 4.3.0)
#>  evaluate      0.23       2023-11-01 [1] CRAN (R 4.3.0)
#>  fansi         1.0.6      2023-12-08 [1] CRAN (R 4.3.0)
#>  farver        2.1.1      2022-07-06 [2] CRAN (R 4.3.0)
#>  fastmap       1.1.1      2023-02-24 [2] CRAN (R 4.3.0)
#>  forcats     * 1.0.0      2023-01-29 [2] CRAN (R 4.3.0)
#>  fs            1.6.3      2023-07-20 [1] CRAN (R 4.3.0)
#>  generics      0.1.3      2022-07-05 [2] CRAN (R 4.3.0)
#>  ggplot2     * 3.5.1      2024-04-23 [1] CRAN (R 4.3.2)
#>  ggupset     * 0.3.0.9002 2023-08-16 [1] local
#>  glue          1.7.0      2024-01-09 [1] CRAN (R 4.3.0)
#>  gtable        0.3.4      2023-08-21 [1] CRAN (R 4.3.0)
#>  highr         0.10       2022-12-22 [2] CRAN (R 4.3.0)
#>  hms           1.1.3      2023-03-21 [2] CRAN (R 4.3.0)
#>  htmltools     0.5.7      2023-11-03 [1] CRAN (R 4.3.0)
#>  knitr         1.45       2023-10-30 [1] CRAN (R 4.3.0)
#>  labeling      0.4.3      2023-08-29 [1] CRAN (R 4.3.0)
#>  lifecycle     1.0.4      2023-11-07 [1] CRAN (R 4.3.0)
#>  lubridate   * 1.9.3      2023-09-27 [1] CRAN (R 4.3.0)
#>  magrittr      2.0.3      2022-03-30 [2] CRAN (R 4.3.0)
#>  munsell       0.5.0      2018-06-12 [2] CRAN (R 4.3.0)
#>  pillar        1.9.0      2023-03-22 [2] CRAN (R 4.3.0)
#>  pkgconfig     2.0.3      2019-09-22 [2] CRAN (R 4.3.0)
#>  purrr       * 1.0.2      2023-08-10 [1] CRAN (R 4.3.0)
#>  R.cache       0.16.0     2022-07-21 [2] CRAN (R 4.3.0)
#>  R.methodsS3   1.8.2      2022-06-13 [2] CRAN (R 4.3.0)
#>  R.oo          1.26.0     2024-01-24 [1] CRAN (R 4.3.2)
#>  R.utils       2.12.3     2023-11-18 [1] CRAN (R 4.3.0)
#>  R6            2.5.1      2021-08-19 [1] CRAN (R 4.3.0)
#>  readr       * 2.1.5      2024-01-10 [1] CRAN (R 4.3.0)
#>  reprex        2.1.0      2024-01-11 [1] CRAN (R 4.3.0)
#>  rlang         1.1.3      2024-01-10 [1] CRAN (R 4.3.0)
#>  rmarkdown     2.25       2023-09-18 [1] CRAN (R 4.3.0)
#>  rstudioapi    0.15.0     2023-07-07 [1] CRAN (R 4.3.0)
#>  scales        1.3.0      2023-11-28 [1] CRAN (R 4.3.0)
#>  sessioninfo   1.2.2      2021-12-06 [2] CRAN (R 4.3.0)
#>  stringi       1.8.3      2023-12-11 [1] CRAN (R 4.3.0)
#>  stringr     * 1.5.1      2023-11-14 [1] CRAN (R 4.3.0)
#>  styler        1.10.2     2023-08-29 [1] CRAN (R 4.3.0)
#>  tibble      * 3.2.1      2023-03-20 [2] CRAN (R 4.3.0)
#>  tidyr       * 1.3.1      2024-01-24 [1] CRAN (R 4.3.2)
#>  tidyselect    1.2.0      2022-10-10 [2] CRAN (R 4.3.0)
#>  tidyverse   * 2.0.0      2023-02-22 [2] CRAN (R 4.3.0)
#>  timechange    0.3.0      2024-01-18 [1] CRAN (R 4.3.0)
#>  tzdb          0.4.0      2023-05-12 [2] CRAN (R 4.3.0)
#>  utf8          1.2.4      2023-10-22 [1] CRAN (R 4.3.0)
#>  vctrs         0.6.5      2023-12-01 [1] CRAN (R 4.3.0)
#>  withr         3.0.0      2024-01-16 [1] CRAN (R 4.3.0)
#>  xfun          0.42       2024-02-08 [1] CRAN (R 4.3.2)
#>  xml2          1.3.6      2023-12-04 [1] CRAN (R 4.3.0)
#>  yaml          2.3.8      2023-12-11 [1] CRAN (R 4.3.0)
#> 
#>  [1] /Users/ahlmanne/Library/R/x86_64/4.3/library
#>  [2] /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

There shouldn't be breaking changes in a minor version release of ggplot2, so I will open an issue with them. For the time being, I recommend you downgrade the ggplot2 version, which should fix the problem:

devtools::install_github("tidyverse/ggplot2@v3.5.0")

@const-ae const-ae mentioned this issue Jun 18, 2024
Closed
const-ae added a commit that referenced this issue Jun 24, 2024
@const-ae
Register theme elements with ggplot2
ab48a26 
This avoids the problem described in #43. See also
tidyverse/ggplot2#5947
@const-ae
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I have fixed the incompatibility with ggplot2 version 3.5.1 and submitted the updated version to CRAN, so it will hopefully be available in the next few days. In the mean time you can install the development version devtools::install_github("const-ae/ggupset")

@jenellewallace
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Worked for me, thank you so much for fixing this issue so promptly!

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