Avoid deprecated scipy.ndimage sub-namespaces (#49) #73
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| --- | |
| name: test_cluster_tools | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| test: | |
| name: ${{ matrix.os }} ${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # os: [ubuntu-latest, windows-latest, macos-latest] | |
| os: [ubuntu-latest] | |
| python-version: [3.8] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| - name: Setup miniconda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: cluster_env | |
| mamba-version: "*" | |
| auto-update-conda: true | |
| environment-file: environment.yml | |
| python-version: ${{ matrix.python-version }} | |
| auto-activate-base: false | |
| env: | |
| ACTIONS_ALLOW_UNSECURE_COMMANDS: true | |
| - name: Install package | |
| shell: bash -l {0} | |
| run: pip install -e . --no-deps | |
| - name: Prepare tests | |
| shell: bash -l {0} | |
| run: python test/base.py | |
| - name: Run tests | |
| shell: bash -l {0} | |
| run: ./run_all_tests.sh |