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Add label stitching functionality #106
Add label stitching functionality #106
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Yeah, it would be good to add a small test. You can do something quite simple: create a segmenation, e.g. via applying connected components to |
I added a simple test as discussed, and I think I can reproduce some issues I spotted (which is good to see already). I kept the test checks limited to avoid the obvious directions where the tests would fail (eg. matching the true number of instances with the merged instances) |
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The tests looks good. We can discuss the issues.
The tests fail because test data from EMBL owncloud currently is not available. The other tests pass now, so I will merge it. |
This PR adds a functionality to stitch labels to merge instance segmentations.
@constantinpape: Should we add tests for this?