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merged 33 commits into from
Nov 6, 2020
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d79abe3
Add nginx boiler plate config
RobertLucian Oct 28, 2020
4283b5e
Merge branch 'master' into fix/inter-process-fairness
RobertLucian Oct 28, 2020
68c63c2
Work on the supervisor process
RobertLucian Oct 29, 2020
ecdbb60
Work on nginx
RobertLucian Oct 29, 2020
80686f6
Add stop scripts for all serving processes
RobertLucian Oct 30, 2020
79f253c
Deny all but to the predict route or empty route
RobertLucian Oct 30, 2020
cbe33cb
Improve performance by adding thread pool + set higher read timeout
RobertLucian Oct 30, 2020
c0c3e06
Fix API readiness
RobertLucian Oct 30, 2020
9da8cc3
Make lint
RobertLucian Oct 30, 2020
b822c37
Add CORS to nginx & rm from uvicorn
RobertLucian Oct 30, 2020
2107437
Terminate nginx gracefully
RobertLucian Oct 31, 2020
f86f775
Increase grace period to 60s for k8s pods
RobertLucian Oct 31, 2020
158fc3d
Make lint
RobertLucian Oct 31, 2020
c8d3dad
Properly shut down nginx when deleting a pod
RobertLucian Oct 31, 2020
3ca88b2
Use jinja2 to generate the nginx config
RobertLucian Nov 2, 2020
c699e2c
Fix jinja generating issues
RobertLucian Nov 2, 2020
ee0ebe1
Adapt all predictor images to use s6-overlay
RobertLucian Nov 2, 2020
8d08afc
Fix linting
RobertLucian Nov 2, 2020
952f829
Fixes for the predictor images
RobertLucian Nov 2, 2020
661806c
Improve comments semantics
RobertLucian Nov 2, 2020
a057188
Stop sidecars when the serving API container has stopped
RobertLucian Nov 3, 2020
5592b53
Pass in just the required value
RobertLucian Nov 3, 2020
b95a2b9
CORTEX_SERVING_PORT not required for waitAPIContainer func
RobertLucian Nov 3, 2020
9b1fcad
Fix bug when batching is done
RobertLucian Nov 3, 2020
30228a4
Fix linting
RobertLucian Nov 3, 2020
877ffdb
Merge branch 'master' into fix/inter-process-fairness
RobertLucian Nov 3, 2020
68bd5b8
Remove unnecessary import
RobertLucian Nov 3, 2020
1b0105c
Remove unwanted line
RobertLucian Nov 3, 2020
3001b87
Increase memory availability to prevent OOM
RobertLucian Nov 3, 2020
3aa9074
Address review requests
RobertLucian Nov 6, 2020
7610385
Simplify location regex in nginx conf
RobertLucian Nov 6, 2020
66824b4
Fix bad service naming for uvicorn + add env sourcer
RobertLucian Nov 6, 2020
29f5475
Fix dependencies.sh script not being executed correctly
RobertLucian Nov 6, 2020
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5 changes: 1 addition & 4 deletions cli/local/docker_spec.go
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,6 @@ package local
import (
"context"
"fmt"
"math"
"path/filepath"
"strings"

Expand Down Expand Up @@ -92,9 +91,7 @@ func getAPIEnv(api *spec.API, awsClient *aws.Client) []string {
"CORTEX_PROJECT_DIR="+_projectDir,
"CORTEX_PROCESSES_PER_REPLICA="+s.Int32(api.Predictor.ProcessesPerReplica),
"CORTEX_THREADS_PER_PROCESS="+s.Int32(api.Predictor.ThreadsPerProcess),
// add 1 because it was required to achieve the target concurrency for 1 process, 1 thread
"CORTEX_MAX_PROCESS_CONCURRENCY="+s.Int64(1+int64(math.Round(float64(consts.DefaultMaxReplicaConcurrency)/float64(api.Predictor.ProcessesPerReplica)))),
"CORTEX_SO_MAX_CONN="+s.Int64(consts.DefaultMaxReplicaConcurrency+100), // add a buffer to be safe
"CORTEX_MAX_REPLICA_CONCURRENCY="+s.Int32(api.Predictor.ProcessesPerReplica*api.Predictor.ThreadsPerProcess+1024), // allow a queue of 1024
"AWS_REGION="+awsClient.Region,
)

Expand Down
12 changes: 12 additions & 0 deletions dev/versions.md
Original file line number Diff line number Diff line change
Expand Up @@ -172,6 +172,18 @@ Note: it's ok if example training notebooks aren't upgraded, as long as the expo
* be careful not to update any of the versions for Inferentia that are not latest in `images/python-predictor-inf/Dockerfile`
1. Rerun all examples and check their logs

## S6-overlay supervisor

1. Locate the `s6-overlay` installation in `images/python-predictor-*/Dockerfile`, `images/tensorflow-predictor/Dockerfile` and `images/onnx-predictor-*/Dockerfile`
1. Update the version in each serving image with the newer one in https://github.com/just-containers/s6-overlay.

## Nginx

1. Run a base image of ubuntu that matches the version tag used for the serving images. The running command is `docker run -it --rm <base-image>`
1. Run `apt update && apt-cache policy nginx`. Notice the latest minor version of nginx (e.g. `1.14`)
1. Locate the `nginx` package in `images/python-predictor-*/Dockerfile`, `images/tensorflow-predictor/Dockerfile` and `images/onnx-predictor-*/Dockerfile`
1. Update the version for all `nginx` appearances using the minor version from step 2 and add an asterisk at the end to denote any version (e.g. `1.14.*`)

## Istio

1. Find the latest [release](https://istio.io/latest/news/releases) and check the release notes (here are the [latest IstioOperator Options](https://istio.io/latest/docs/reference/config/istio.operator.v1alpha1/))
Expand Down
2 changes: 1 addition & 1 deletion examples/sklearn/iris-classifier/cortex.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,4 +12,4 @@
model_type: classification
compute:
cpu: 0.2
mem: 100M
mem: 200M
1 change: 1 addition & 0 deletions examples/sklearn/iris-classifier/requirements.txt
Original file line number Diff line number Diff line change
@@ -1 +1,2 @@
boto3
scikit-learn==0.21.3
3 changes: 2 additions & 1 deletion images/neuron-rtd/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,8 @@ RUN yum install -y \
aws-neuron-runtime-1.0.9592.0 \
procps-ng-3.3.10-26.amzn2.x86_64 \
gzip \
tar
tar \
curl

ENV PATH="/opt/aws/neuron/bin:${PATH}"

Expand Down
10 changes: 9 additions & 1 deletion images/onnx-predictor-cpu/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,14 @@ RUN apt-get update -qq && apt-get install -y -q \
unzip \
zlib1g-dev \
locales \
nginx=1.14.* \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN cd /tmp/ && \
curl -L --output s6-overlay-amd64-installer "https://github.com/just-containers/s6-overlay/releases/download/v2.1.0.2/s6-overlay-amd64-installer" && \
cd - && \
chmod +x /tmp/s6-overlay-amd64-installer && /tmp/s6-overlay-amd64-installer / && rm /tmp/s6-overlay-amd64-installer

RUN locale-gen en_US.UTF-8
ENV LANG=en_US.UTF-8 LANGUAGE=en_US.en LC_ALL=en_US.UTF-8

Expand Down Expand Up @@ -68,4 +74,6 @@ COPY pkg/workloads/cortex/consts.py /src/cortex
COPY pkg/workloads/cortex/lib /src/cortex/lib
COPY pkg/workloads/cortex/serve /src/cortex/serve

ENTRYPOINT ["/src/cortex/serve/run.sh"]
RUN mv /src/cortex/serve/init/bootloader.sh /etc/cont-init.d/bootloader.sh

ENTRYPOINT ["/init"]
10 changes: 9 additions & 1 deletion images/onnx-predictor-gpu/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,14 @@ RUN apt-get update -qq && apt-get install -y -q \
unzip \
zlib1g-dev \
locales \
nginx=1.14.* \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN cd /tmp/ && \
curl -L --output s6-overlay-amd64-installer "https://github.com/just-containers/s6-overlay/releases/download/v2.1.0.2/s6-overlay-amd64-installer" && \
cd - && \
chmod +x /tmp/s6-overlay-amd64-installer && /tmp/s6-overlay-amd64-installer / && rm /tmp/s6-overlay-amd64-installer

RUN locale-gen en_US.UTF-8
ENV LANG=en_US.UTF-8 LANGUAGE=en_US.en LC_ALL=en_US.UTF-8

Expand Down Expand Up @@ -68,4 +74,6 @@ COPY pkg/workloads/cortex/consts.py /src/cortex
COPY pkg/workloads/cortex/lib /src/cortex/lib
COPY pkg/workloads/cortex/serve /src/cortex/serve

ENTRYPOINT ["/src/cortex/serve/run.sh"]
RUN mv /src/cortex/serve/init/bootloader.sh /etc/cont-init.d/bootloader.sh

ENTRYPOINT ["/init"]
10 changes: 9 additions & 1 deletion images/python-predictor-cpu/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,14 @@ RUN apt-get update -qq && apt-get install -y -q \
unzip \
zlib1g-dev \
locales \
nginx=1.14.* \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN cd /tmp/ && \
curl -L --output s6-overlay-amd64-installer "https://github.com/just-containers/s6-overlay/releases/download/v2.1.0.2/s6-overlay-amd64-installer" && \
cd - && \
chmod +x /tmp/s6-overlay-amd64-installer && /tmp/s6-overlay-amd64-installer / && rm /tmp/s6-overlay-amd64-installer

RUN locale-gen en_US.UTF-8
ENV LANG=en_US.UTF-8 LANGUAGE=en_US.en LC_ALL=en_US.UTF-8

Expand Down Expand Up @@ -88,4 +94,6 @@ COPY pkg/workloads/cortex/consts.py /src/cortex
COPY pkg/workloads/cortex/lib /src/cortex/lib
COPY pkg/workloads/cortex/serve /src/cortex/serve

ENTRYPOINT ["/src/cortex/serve/run.sh"]
RUN mv /src/cortex/serve/init/bootloader.sh /etc/cont-init.d/bootloader.sh

ENTRYPOINT ["/init"]
10 changes: 9 additions & 1 deletion images/python-predictor-gpu/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -11,8 +11,14 @@ RUN apt-get update -qq && apt-get install -y -q \
unzip \
zlib1g-dev \
locales \
nginx=1.14.* \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN cd /tmp/ && \
curl -L --output s6-overlay-amd64-installer "https://github.com/just-containers/s6-overlay/releases/download/v2.1.0.2/s6-overlay-amd64-installer" && \
cd - && \
chmod +x /tmp/s6-overlay-amd64-installer && /tmp/s6-overlay-amd64-installer / && rm /tmp/s6-overlay-amd64-installer

RUN locale-gen en_US.UTF-8
ENV LANG=en_US.UTF-8 LANGUAGE=en_US.en LC_ALL=en_US.UTF-8

Expand Down Expand Up @@ -93,4 +99,6 @@ COPY pkg/workloads/cortex/consts.py /src/cortex
COPY pkg/workloads/cortex/lib /src/cortex/lib
COPY pkg/workloads/cortex/serve /src/cortex/serve

ENTRYPOINT ["/src/cortex/serve/run.sh"]
RUN mv /src/cortex/serve/init/bootloader.sh /etc/cont-init.d/bootloader.sh

ENTRYPOINT ["/init"]
8 changes: 7 additions & 1 deletion images/python-predictor-inf/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,9 @@ RUN apt-get update -qq && apt-get install -y -q \
aws-neuron-runtime=1.1.1402.0 && \
apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN wget -P /tmp/ https://github.com/just-containers/s6-overlay/releases/download/v2.1.0.2/s6-overlay-amd64-installer && \
chmod +x /tmp/s6-overlay-amd64-installer && /tmp/s6-overlay-amd64-installer / && rm /tmp/s6-overlay-amd64-installer

ENV PATH=/opt/aws/neuron/bin/:$PATH

RUN apt-get update -qq && apt-get install -y -q \
Expand All @@ -21,6 +24,7 @@ RUN apt-get update -qq && apt-get install -y -q \
unzip \
zlib1g-dev \
locales \
nginx=1.14.* \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN locale-gen en_US.UTF-8
Expand Down Expand Up @@ -100,4 +104,6 @@ COPY pkg/workloads/cortex/consts.py /src/cortex
COPY pkg/workloads/cortex/lib /src/cortex/lib
COPY pkg/workloads/cortex/serve /src/cortex/serve

ENTRYPOINT ["/src/cortex/serve/run.sh"]
RUN mv /src/cortex/serve/init/bootloader.sh /etc/cont-init.d/bootloader.sh

ENTRYPOINT ["/init"]
12 changes: 10 additions & 2 deletions images/tensorflow-predictor/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,14 @@ RUN apt-get update -qq && apt-get install -y -q \
unzip \
zlib1g-dev \
locales \
nginx=1.14.* \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

RUN cd /tmp/ && \
curl -L --output s6-overlay-amd64-installer "https://github.com/just-containers/s6-overlay/releases/download/v2.1.0.2/s6-overlay-amd64-installer" && \
cd - && \
chmod +x /tmp/s6-overlay-amd64-installer && /tmp/s6-overlay-amd64-installer / && rm /tmp/s6-overlay-amd64-installer

RUN locale-gen en_US.UTF-8
ENV LANG=en_US.UTF-8 LANGUAGE=en_US.en LC_ALL=en_US.UTF-8

Expand Down Expand Up @@ -68,8 +74,10 @@ RUN test "${SLIM}" = "true" || ( \
tensorflow-hub==0.9.0 \
)

COPY pkg/workloads/cortex/consts.py /src/cortex/
COPY pkg/workloads/cortex/consts.py /src/cortex
COPY pkg/workloads/cortex/lib /src/cortex/lib
COPY pkg/workloads/cortex/serve /src/cortex/serve

ENTRYPOINT ["/src/cortex/serve/run.sh"]
RUN mv /src/cortex/serve/init/bootloader.sh /etc/cont-init.d/bootloader.sh

ENTRYPOINT ["/init"]
4 changes: 4 additions & 0 deletions images/tensorflow-serving-cpu/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,5 +1,9 @@
FROM tensorflow/serving:2.3.0

RUN apt-get update -qq && apt-get install -y -q \
curl \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

COPY images/tensorflow-serving-cpu/run.sh /src/
RUN chmod +x /src/run.sh

Expand Down
1 change: 1 addition & 0 deletions images/tensorflow-serving-gpu/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,7 @@ FROM tensorflow/serving:2.3.0-gpu
RUN apt-get update -qq && apt-get install -y --no-install-recommends -q \
libnvinfer6=6.0.1-1+cuda10.1 \
libnvinfer-plugin6=6.0.1-1+cuda10.1 \
curl \
&& apt-get clean -qq && rm -rf /var/lib/apt/lists/*

COPY images/tensorflow-serving-gpu/run.sh /src/
Expand Down
1 change: 1 addition & 0 deletions images/tensorflow-serving-inf/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,7 @@ FROM ubuntu:18.04
RUN apt-get update -qq && apt-get install -y -q \
gettext-base \
supervisor \
curl \
wget \
netcat \
gnupg && \
Expand Down
43 changes: 33 additions & 10 deletions pkg/operator/operator/k8s.go
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,6 @@ import (
"encoding/base64"
"encoding/json"
"fmt"
"math"
"path"
"strings"

Expand Down Expand Up @@ -179,6 +178,7 @@ func PythonPredictorContainers(api *spec.API) ([]kcore.Container, []kcore.Volume
VolumeMounts: apiPodVolumeMounts,
ReadinessProbe: FileExistsProbe(_apiReadinessFile),
LivenessProbe: _apiLivenessProbe,
Lifecycle: nginxGracefulStopper(api.Kind),
Resources: kcore.ResourceRequirements{
Requests: apiPodResourceList,
Limits: apiPodResourceLimitsList,
Expand Down Expand Up @@ -267,6 +267,7 @@ func TensorFlowPredictorContainers(api *spec.API) ([]kcore.Container, []kcore.Vo
VolumeMounts: volumeMounts,
ReadinessProbe: FileExistsProbe(_apiReadinessFile),
LivenessProbe: _apiLivenessProbe,
Lifecycle: nginxGracefulStopper(api.Kind),
Resources: kcore.ResourceRequirements{
Requests: apiResourceList,
},
Expand Down Expand Up @@ -320,6 +321,7 @@ func ONNXPredictorContainers(api *spec.API) []kcore.Container {
VolumeMounts: DefaultVolumeMounts,
ReadinessProbe: FileExistsProbe(_apiReadinessFile),
LivenessProbe: _apiLivenessProbe,
Lifecycle: nginxGracefulStopper(api.Kind),
Resources: kcore.ResourceRequirements{
Requests: resourceList,
Limits: resourceLimitsList,
Expand Down Expand Up @@ -409,15 +411,6 @@ func getEnvVars(api *spec.API, container string) []kcore.EnvVar {
Name: "CORTEX_MAX_REPLICA_CONCURRENCY",
Value: s.Int64(api.Autoscaling.MaxReplicaConcurrency),
},
kcore.EnvVar{
Name: "CORTEX_MAX_PROCESS_CONCURRENCY",
// add 1 because it was required to achieve the target concurrency for 1 process, 1 thread
Value: s.Int64(1 + int64(math.Round(float64(api.Autoscaling.MaxReplicaConcurrency)/float64(api.Predictor.ProcessesPerReplica)))),
},
kcore.EnvVar{
Name: "CORTEX_SO_MAX_CONN",
Value: s.Int64(api.Autoscaling.MaxReplicaConcurrency + 100), // add a buffer to be safe
},
)
}

Expand Down Expand Up @@ -699,6 +692,7 @@ func tensorflowServingContainer(api *spec.API, volumeMounts []kcore.VolumeMount,
FailureThreshold: 2,
Handler: probeHandler,
},
Lifecycle: waitAPIContainerToStop(api.Kind),
Resources: resources,
Ports: ports,
}
Expand All @@ -720,6 +714,7 @@ func neuronRuntimeDaemonContainer(api *spec.API, volumeMounts []kcore.VolumeMoun
},
VolumeMounts: volumeMounts,
ReadinessProbe: socketExistsProbe(_neuronRTDSocket),
Lifecycle: waitAPIContainerToStop(api.Kind),
Resources: kcore.ResourceRequirements{
Requests: kcore.ResourceList{
"hugepages-2Mi": *kresource.NewQuantity(totalHugePages, kresource.BinarySI),
Expand Down Expand Up @@ -794,6 +789,34 @@ func socketExistsProbe(socketName string) *kcore.Probe {
}
}

func nginxGracefulStopper(apiKind userconfig.Kind) *kcore.Lifecycle {
if apiKind == userconfig.RealtimeAPIKind {
return &kcore.Lifecycle{
PreStop: &kcore.Handler{
Exec: &kcore.ExecAction{
// the sleep is required to wait for any k8s-related race conditions
// as described in https://medium.com/codecademy-engineering/kubernetes-nginx-and-zero-downtime-in-production-2c910c6a5ed8
Command: []string{"/bin/sh", "-c", "sleep 5; /usr/sbin/nginx -s quit; while pgrep -x nginx; do sleep 1; done"},
},
},
}
}
return nil
}

func waitAPIContainerToStop(apiKind userconfig.Kind) *kcore.Lifecycle {
if apiKind == userconfig.RealtimeAPIKind {
return &kcore.Lifecycle{
PreStop: &kcore.Handler{
Exec: &kcore.ExecAction{
Command: []string{"/bin/sh", "-c", fmt.Sprintf("while curl localhost:%s/nginx_status; do sleep 1; done", DefaultPortStr)},
},
},
}
}
return nil
}

var BaseEnvVars = []kcore.EnvFromSource{
{
ConfigMapRef: &kcore.ConfigMapEnvSource{
Expand Down
11 changes: 8 additions & 3 deletions pkg/operator/resources/realtimeapi/k8s_specs.go
Original file line number Diff line number Diff line change
Expand Up @@ -27,6 +27,8 @@ import (
kcore "k8s.io/api/core/v1"
)

var _terminationGracePeriodSeconds int64 = 60 // seconds

func deploymentSpec(api *spec.API, prevDeployment *kapps.Deployment) *kapps.Deployment {
switch api.Predictor.Type {
case userconfig.TensorFlowPredictorType:
Expand Down Expand Up @@ -74,7 +76,8 @@ func tensorflowAPISpec(api *spec.API, prevDeployment *kapps.Deployment) *kapps.D
"traffic.sidecar.istio.io/excludeOutboundIPRanges": "0.0.0.0/0",
},
K8sPodSpec: kcore.PodSpec{
RestartPolicy: "Always",
RestartPolicy: "Always",
TerminationGracePeriodSeconds: pointer.Int64(_terminationGracePeriodSeconds),
InitContainers: []kcore.Container{
operator.InitContainer(api),
},
Expand Down Expand Up @@ -123,7 +126,8 @@ func pythonAPISpec(api *spec.API, prevDeployment *kapps.Deployment) *kapps.Deplo
"traffic.sidecar.istio.io/excludeOutboundIPRanges": "0.0.0.0/0",
},
K8sPodSpec: kcore.PodSpec{
RestartPolicy: "Always",
RestartPolicy: "Always",
TerminationGracePeriodSeconds: pointer.Int64(_terminationGracePeriodSeconds),
InitContainers: []kcore.Container{
operator.InitContainer(api),
},
Expand Down Expand Up @@ -175,7 +179,8 @@ func onnxAPISpec(api *spec.API, prevDeployment *kapps.Deployment) *kapps.Deploym
InitContainers: []kcore.Container{
operator.InitContainer(api),
},
Containers: containers,
TerminationGracePeriodSeconds: pointer.Int64(_terminationGracePeriodSeconds),
Containers: containers,
NodeSelector: map[string]string{
"workload": "true",
},
Expand Down
8 changes: 5 additions & 3 deletions pkg/types/spec/validations.go
Original file line number Diff line number Diff line change
Expand Up @@ -399,9 +399,11 @@ func autoscalingValidation(provider types.ProviderType) *cr.StructFieldValidatio
{
StructField: "MaxReplicaConcurrency",
Int64Validation: &cr.Int64Validation{
Default: consts.DefaultMaxReplicaConcurrency,
GreaterThan: pointer.Int64(0),
LessThanOrEqualTo: pointer.Int64(math.MaxUint16),
Default: consts.DefaultMaxReplicaConcurrency,
GreaterThan: pointer.Int64(0),
// our configured nginx can theoretically accept up to 32768 connections, but during testing,
// it has been observed that the number is just slightly lower, so it has been offset by 2678
LessThanOrEqualTo: pointer.Int64(30000),
},
},
{
Expand Down
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