Test of package installation & execution

Fix normalization of units in YAML #1234

Triggered via push September 13, 2023 23:32

langmm

pushed ebca0b9

topic/callbacks

Status Failure

Total duration 41m 29s

Artifacts –

This run and associated checks have been archived and are scheduled for deletion. Learn more about checks retention

test-install.yml

on: push

Prepare test parameters

Build the Docs

21m 32s

Matrix: test_conda

Matrix: test_pip

Matrix: test_rmq_conda

Matrix: test_rmq_pip

Matrix: test_stripped

Matrix: build_wheels

Build source distribution

Build and Publish Docker images

Update the schema used by the model submission form

Upload wheels

Upload sdist

Annotations

57 errors and 32 warnings

Test (3.7, macos, pip, --suite=types --skip-languages c cpp, ), Install C = true

Process completed with exit code 1.

Test (3.7, macos, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

Process completed with exit code 1.

Test (3.7, macos, pip, --suite=types --languages c cpp, ), Install C = true

Process completed with exit code 1.

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

there is no package called 'units'

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

package or namespace load failed for 'reticulate' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

Process completed with exit code 1.

Test (3.7, windows, pip, --long-running, ), Install C = false

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --long-running, ), Install C = false

there is no package called 'units'

Test (3.7, windows, pip, --long-running, ), Install C = false

there is no package called 'Rcpp'

Test (3.7, windows, pip, --long-running, ), Install C = false

there is no package called 'reticulate'

Test (3.7, windows, pip, --long-running, ), Install C = false

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --long-running, ), Install C = false

there is no package called 'reticulate'

Test (3.7, windows, pip, --long-running, ), Install C = false

Process completed with exit code 1.

Test (3.9, ubuntu, conda, --long-running --remote-service, --suites examples --parametrize-language=sbml), Install C = true

Process completed with exit code 1.

Test (3.8, ubuntu, conda, --long-running, ), Install C = true

Process completed with exit code 1.

Test (3.7, ubuntu, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

Process completed with exit code 1.

Build the Docs

Process completed with exit code 1.

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

package or namespace load failed for 'reticulate' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

there is no package called 'units'

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

Process completed with exit code 1.

Test (3.6, ubuntu, conda, --long-running, ), Install C = true

Process completed with exit code 1.

Test (3.7, ubuntu, pip, --long-running --suites timing demos top, ), Install C = true

Process completed with exit code 1.

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

there is no package called 'units'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

there is no package called 'reticulate'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

there is no package called 'reticulate'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

Process completed with exit code 1.

Test (3.7, ubuntu, pip, --suite=types --skip-languages c cpp, ), Install C = true

Process completed with exit code 1.

Test (3.7, ubuntu, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Process completed with exit code 1.

Test (3.7, ubuntu, pip, --suite=types --languages c cpp, ), Install C = true

Process completed with exit code 1.

Test (3.7, macos, pip, --long-running --suites timing demos top, ), Install C = true

Process completed with exit code 1.

Test stripped install (3.7, ubuntu, pip)

Process completed with exit code 1.

Test stripped install (3.7, windows, pip)

Process completed with exit code 1.

Test (3.7, windows, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Process completed with exit code 1.

Test stripped install (3.7, macos, pip)

Process completed with exit code 1.

Test (3.7, macos, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Process completed with exit code 1.

Test (3.7, macos, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Process completed with exit code 1.

Test (3.8, macos, conda, --suites examples top --parametrize-example-name=rpc_lesson3, tests/test_tools.py), Install C = true

Process completed with exit code 1.

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

there is no package called 'reticulate'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

there is no package called 'units'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

there is no package called 'yggdrasil'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

there is no package called 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

Process completed with exit code 1.

Test RMQ (3.7, ubuntu, conda)

Process completed with exit code 1.

Test RMQ (3.7, ubuntu, pip)

Process completed with exit code 1.

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --suite=types --languages c cpp, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --long-running, ), Install C = false

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --long-running, ), Install C = false

restored 'Rcpp'

Test (3.7, windows, pip, --long-running, ), Install C = false

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --long-running, ), Install C = false

restored 'Rcpp'

Test (3.9, ubuntu, conda, --long-running --remote-service, --suites examples --parametrize-language=sbml), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.8, ubuntu, conda, --long-running, ), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --suite=examples --extra-examples --mpi-script=run_mpi.sh --mpi-nproc=3, ), Install C = true

restored 'Rcpp'

Test (3.6, ubuntu, conda, --long-running, ), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --suite=types --skip-languages c cpp, ), Install C = true

restored 'Rcpp'

Test (3.7, ubuntu, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.7, windows, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.7, macos, conda, --long-running --mpi-script=run_mpi.sh, --suite=examples --parametrize-example-name=backwards), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.8, macos, conda, --suites examples top --parametrize-example-name=rpc_lesson3, tests/test_tools.py), Install C = true

Mamba support is still experimental and can result in differently solved environments!

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

restored 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

cannot remove prior installation of package 'Rcpp'

Test (3.7, windows, pip, --long-running --suites timing demos top, ), Install C = true

restored 'Rcpp'

Test RMQ (3.7, ubuntu, conda)

Mamba support is still experimental and can result in differently solved environments!

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Fix normalization of units in YAML #1234

Summary