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fix(back): fluidattacks#1234 computeOnAwsBatch
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- adjust python env for the computeOnAwsBatch util
- support dry run to enable the util build check
- add a job that checks the build of the util
- update docs

Signed-off-by: Daniel F. Murcia Rivera <danmur97@outlook.com>
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danmur97 committed Jan 4, 2024
1 parent a3dcff6 commit 7c6ebf7
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Showing 15 changed files with 182 additions and 110 deletions.
16 changes: 16 additions & 0 deletions .github/workflows/dev.yml
Original file line number Diff line number Diff line change
Expand Up @@ -628,6 +628,22 @@ jobs:
- uses: cachix/install-nix-action@6ed004b9ccb68dbc28e7c85bee15fa93dbd214ac
- name: /testTerraform/module
run: nix-env -if . && m . /testTerraform/module

linux_testTerraform_module:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@f095bcc56b7c2baf48f3ac70d6d6782f4f553222
- uses: docker://docker.io/nixos/nix@sha256:c3db4c484f6b1ee6c9bb8ca90307cfbeca8ef88156840911356a677eeaff4845
name: /tests/computeOnAwsBatch
with:
args: nix-env -if . && m . /tests/computeOnAwsBatch
macos_testTerraform_module:
runs-on: macos-latest
steps:
- uses: actions/checkout@f095bcc56b7c2baf48f3ac70d6d6782f4f553222
- uses: cachix/install-nix-action@6ed004b9ccb68dbc28e7c85bee15fa93dbd214ac
- name: /tests/computeOnAwsBatch
run: nix-env -if . && m . /tests/computeOnAwsBatch
name: dev
on:
pull_request:
Expand Down
16 changes: 16 additions & 0 deletions .github/workflows/prod.yml
Original file line number Diff line number Diff line change
Expand Up @@ -821,6 +821,22 @@ jobs:
run: nix-env -if . && m . /testTerraform/module
env:
CACHIX_AUTH_TOKEN: ${{ secrets.CACHIX_AUTH_TOKEN }}

linux_testTerraform_module:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@f095bcc56b7c2baf48f3ac70d6d6782f4f553222
- uses: docker://docker.io/nixos/nix@sha256:c3db4c484f6b1ee6c9bb8ca90307cfbeca8ef88156840911356a677eeaff4845
name: /tests/computeOnAwsBatch
with:
args: nix-env -if . && m . /tests/computeOnAwsBatch
macos_testTerraform_module:
runs-on: macos-latest
steps:
- uses: actions/checkout@f095bcc56b7c2baf48f3ac70d6d6782f4f553222
- uses: cachix/install-nix-action@6ed004b9ccb68dbc28e7c85bee15fa93dbd214ac
- name: /tests/computeOnAwsBatch
run: nix-env -if . && m . /tests/computeOnAwsBatch
name: prod
on:
push:
Expand Down
13 changes: 12 additions & 1 deletion docs/src/api/builtins/deploy.md
Original file line number Diff line number Diff line change
Expand Up @@ -8,11 +8,20 @@ When used as a Makes declaration (at makes.nix attrs):
Job groups to submit.
Defaults to `{ }`.

Types:
When used as a makes input:

- computeOnAwsBatch: `JobType -> SourceAble`
Source able batch file to send jobs to aws batch.

???+ warning

When used as a makes input, all arguments are required
and defaults are not available.
However nested jobs (see `nextJob` argument)
do have defaults enabled.

Types:

- `JobType` = `attrs`
- allowDuplicates: `bool` (Optional Attr)
Set to `false` in order to prevent submitting the job
Expand All @@ -32,6 +41,8 @@ Types:
It overrides the one specified
in the Batch job definition.
Additional arguments can be propagated when running this module output.
- dryRun: `bool` (Optional Attr) (Not supported on nextJob)
Do not send any job. Only check the correctness of the pipeline definition.
- definition: `str`
Name of the Batch job definition
that we will use as base for submitting the job.
Expand Down
20 changes: 20 additions & 0 deletions makes/tests/computeOnAwsBatch/main.nix
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
{computeOnAwsBatch, ...}:
computeOnAwsBatch {
dryRun = true;
allowDuplicates = true;
attempts = 1;
attemptDurationSeconds = 60;
command = ["foo"];
definition = "foo";
environment = [];
includePositionalArgsInName = true;
name = "foo";
nextJob = {};
memory = 1;
parallel = 1;
propagateTags = true;
queue = "foo";
setup = [];
tags = {};
vcpus = 1;
}
38 changes: 19 additions & 19 deletions src/args/compute-on-aws-batch/batch-client/batch_client/_cli.py
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@
)
from .core import (
EnvVarPointer,
JobPipelineDraft,
QueueName,
)
import click
Expand Down Expand Up @@ -37,9 +38,9 @@ def _action() -> JsonObj:
return Cmd.from_cmd(_action)


@click.command() # type: ignore[misc]
@click.option("--pipeline", type=click.Path(exists=True), required=True) # type: ignore[misc]
@click.argument("args", nargs=-1) # type: ignore[misc]
@click.command()
@click.option("--pipeline", type=click.Path(exists=True), required=True)
@click.argument("args", nargs=-1)
def submit_job(
pipeline: str,
args: FrozenList[str],
Expand Down Expand Up @@ -74,32 +75,31 @@ def _sep(item: str) -> bool:
.map(lambda x: tuple(x))
.to_list()
)
drafts = _queue_from_env.bind(
pipeline_draft = _queue_from_env.bind(
lambda queue: _root.map(
lambda root: decode.decode_all_drafts(root, arg_groups, queue)
)
).map(
lambda t: (
t[0].map(
lambda r: r.alt(
lambda e: Exception(f"Invalid job draft i.e. {e}")
).unwrap()
),
t[1],
)
)
cmd: Cmd[None] = drafts.bind(
lambda d: new_client().bind(
lambda c: utils.extract_single(d[0]).map(
lambda j: actions.send_single_job(c, j, d[1]),

def _execute(draft: JobPipelineDraft) -> Cmd[None]:
# Handle dry run logic
action = new_client().bind(
lambda c: utils.extract_single(draft.drafts).map(
lambda j: actions.send_single_job(
c, j, draft.allow_duplicates
),
lambda p: actions.send_pipeline(c, p),
)
)
)
if draft.dry_run:
return Cmd.from_cmd(lambda: None)
return action

cmd: Cmd[None] = pipeline_draft.bind(_execute)
cmd.compute()


@click.group() # type: ignore[misc]
@click.group()
def main() -> None:
pass

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,6 @@
ApiClient,
)
from batch_client.core import (
AllowDuplicates,
DependentJobDraft,
JobDependencies,
JobDraft,
Expand All @@ -25,7 +24,7 @@
def send_single_job(
client: ApiClient,
draft: JobDraft,
allow_duplicates: AllowDuplicates,
allow_duplicates: bool,
) -> Cmd[None]:
dup_msg = Cmd.from_cmd(lambda: LOG.info("Detecting duplicates..."))
skipped_msg = Cmd.from_cmd(
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -20,6 +20,7 @@
FrozenDict,
FrozenList,
Maybe,
PureIter,
Result,
ResultE,
)
Expand Down Expand Up @@ -240,6 +241,7 @@ class RawJobDraft:
allow_duplicates: bool
args_in_name: bool
propagate_tags: bool
dry_run: bool
next_job: Maybe[RawJobDraft]


Expand All @@ -266,3 +268,10 @@ class DependentJobDraft:
@dataclass(frozen=True)
class AllowDuplicates:
value: bool


@dataclass(frozen=True)
class JobPipelineDraft:
drafts: PureIter[JobDraft]
allow_duplicates: bool
dry_run: bool
13 changes: 10 additions & 3 deletions src/args/compute-on-aws-batch/batch-client/batch_client/decode.py
Original file line number Diff line number Diff line change
Expand Up @@ -6,13 +6,13 @@
utils,
)
from batch_client.core import (
AllowDuplicates,
Attempts,
Command,
EnvVarPointer,
JobDefinition,
JobDraft,
JobName,
JobPipelineDraft,
JobSize,
Manifest,
QueueName,
Expand Down Expand Up @@ -131,6 +131,7 @@ def _decode_raw_draft(raw: JsonObj, unwrapper: ResultUnwrapper) -> RawJobDraft:
_allow_duplicates = _require(raw, "allowDuplicates", _to_bool)
_args_in_name = _require(raw, "includePositionalArgsInName", _to_bool)
_propagate_tags = _require(raw, "propagateTags", _to_bool)
_dry_run = _require(raw, "dryRun", _to_bool)
_next = _require(raw, "nextJob", Unfolder.to_json).bind(decode_raw_draft)
return RawJobDraft(
unwrapper.unwrap(_name),
Expand All @@ -147,6 +148,7 @@ def _decode_raw_draft(raw: JsonObj, unwrapper: ResultUnwrapper) -> RawJobDraft:
unwrapper.unwrap(_allow_duplicates),
unwrapper.unwrap(_args_in_name),
unwrapper.unwrap(_propagate_tags),
unwrapper.unwrap(_dry_run),
unwrapper.unwrap(_next),
)

Expand Down Expand Up @@ -222,7 +224,7 @@ def decode_all_drafts(
root: RawJobDraft,
args: FrozenList[FrozenList[str]],
queue_from_env: ResultE[QueueName],
) -> Tuple[PureIter[ResultE[JobDraft]], AllowDuplicates]:
) -> JobPipelineDraft:
items = (
_raw_jobs(root)
.enumerate(0)
Expand All @@ -234,4 +236,9 @@ def decode_all_drafts(
)
)
)
return (items, AllowDuplicates(root.allow_duplicates))
drafts = items.map(
lambda r: r.alt(
lambda e: Exception(f"Invalid job draft i.e. {e}")
).unwrap()
)
return JobPipelineDraft(drafts, root.allow_duplicates, root.dry_run)
6 changes: 3 additions & 3 deletions src/args/compute-on-aws-batch/batch-client/build/default.nix
Original file line number Diff line number Diff line change
@@ -1,11 +1,11 @@
{
makePythonPyprojectPackage,
makes_inputs,
nixpkgs,
python_version,
src,
}: let
deps = import ./deps {
inherit nixpkgs python_version;
inherit makes_inputs nixpkgs python_version;
};
pkgDeps = {
runtime_deps = with deps.python_pkgs; [
Expand All @@ -24,7 +24,7 @@
pytest
];
};
packages = makePythonPyprojectPackage {
packages = makes_inputs.makePythonPyprojectPackage {
inherit (deps.lib) buildEnv buildPythonPackage;
inherit pkgDeps src;
};
Expand Down
Original file line number Diff line number Diff line change
@@ -1,13 +1,29 @@
{
lib,
makes_inputs,
nixpkgs,
python_pkgs,
python_version,
}: let
commit = "72a495bb933f052ad812292b468ca3e18fd9dde4";
src = builtins.fetchTarball {
sha256 = "sha256:0413zl4y92dbdfmck070x7dhp5cxx66xd2pxpxg3gbhaw0yqzhqd";
commit = "fd64a300bda15c2389f5bfb314f48fb5b2a0e47a"; # 2.4.0+2
raw_src = builtins.fetchTarball {
sha256 = "sha256:0g1md5fiyzqi9xfh1qxf0mh32k8nb06w0yhc17rr5a0ijiskb8i4";
url = "https://gitlab.com/dmurciaatfluid/arch_lint/-/archive/${commit}/arch_lint-${commit}.tar";
};
in
import "${src}/build" {
src = import "${raw_src}/build/filter.nix" nixpkgs.nix-filter raw_src;
bundle = import "${raw_src}/build" {
makesLib = makes_inputs;
inherit nixpkgs python_version src;
}
};
in
bundle.build_bundle (
default: required_deps: builder:
builder lib (
required_deps (
python_pkgs
// {
inherit (default.python_pkgs) grimp;
}
)
)
)
37 changes: 19 additions & 18 deletions src/args/compute-on-aws-batch/batch-client/build/deps/default.nix
Original file line number Diff line number Diff line change
@@ -1,4 +1,5 @@
{
makes_inputs,
nixpkgs,
python_version,
}: let
Expand All @@ -8,32 +9,32 @@
inherit (nixpkgs.python3Packages) fetchPypi;
};

utils = import ./override_utils.nix;
pkgs_overrides = override: python_pkgs: builtins.mapAttrs (_: override python_pkgs) python_pkgs;

arch-lint = import ./arch_lint.nix {inherit nixpkgs python_version;};
fa-purity = let
core = import ./fa_purity.nix {inherit nixpkgs python_version;};
in {
"${python_version}" = core;
};
utils = makes_inputs.pythonOverrideUtils;

layer_1 = python_pkgs:
python_pkgs
// {
arch-lint = arch-lint.pkg;
fa-purity = fa-purity."${python_version}".pkg;
arch-lint = let
result = import ./arch_lint.nix {
inherit lib makes_inputs nixpkgs python_pkgs python_version;
};
in
result.pkg;
mypy-boto3-batch = import ./boto3/batch-stubs.nix {inherit lib python_pkgs;};
types-boto3 = import ./boto3/stubs.nix {inherit lib python_pkgs;};
};
layer_2 = python_pkgs:
python_pkgs
// {
fa-purity = let
result = import ./fa_purity.nix {
inherit lib makes_inputs nixpkgs python_pkgs python_version;
};
in
result.pkg;
};

fa_purity_override = python_pkgs: utils.replace_pkg ["fa_purity"] python_pkgs.fa-purity;
overrides = map pkgs_overrides [
fa_purity_override
(_: utils.no_check_override)
];

python_pkgs = utils.compose ([layer_1] ++ overrides) nixpkgs."${python_version}Packages";
python_pkgs = utils.compose [layer_2 layer_1] nixpkgs."${python_version}Packages";
in {
inherit lib python_pkgs;
}
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