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16 Open 47 Closed
16 Open 47 Closed
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Issues list

Upload "bed header" information along with the bed file
#98 opened Jan 28, 2025 by donaldcampbelljr
Add full file name plus its extension to the table during processing and upload
#97 opened Jan 28, 2025 by donaldcampbelljr
Add "File Too Large" Error to the error types
#96 opened Jan 28, 2025 by donaldcampbelljr
Add submission date to the table question Further information is requested
#95 opened Jan 28, 2025 by donaldcampbelljr
For beds with columns that do not adhere to the formal specification, can we generate a schema for them? bedClassifier question Further information is requested
#94 opened Jan 28, 2025 by donaldcampbelljr
Rename bed_type column to bed_spec_compliance bedClassifier
#93 opened Jan 28, 2025 by donaldcampbelljr
1 task
Create an ontology of genomic region file formats in JSON format bedClassifier
#92 opened Jan 28, 2025 by donaldcampbelljr
Extend bed formats to bed classifier, e.g. gappedPeak bedClassifier
#91 opened Jan 28, 2025 by donaldcampbelljr
1
Switch bedToBigBed to bigTools written in rust enhancement New feature or request
#89 opened Jan 16, 2025 by khoroshevskyi
2
Ref genome validator - improvements
#86 opened Nov 19, 2024 by khoroshevskyi
@donaldcampbelljr
check bed classifier
#82 opened Nov 3, 2024 by khoroshevskyi
@donaldcampbelljr
speed up bedboss / bedboss profiling brainstorming
#78 opened Sep 27, 2024 by khoroshevskyi
1
Should we standardize bed files? brainstorming question Further information is requested
#62 opened Apr 11, 2024 by khoroshevskyi
2
Improve BED Classifier
#60 opened Apr 11, 2024 by donaldcampbelljr
@donaldcampbelljr
2
bedset - create new statistics and metadata brainstorming
#55 opened Mar 21, 2024 by khoroshevskyi
1 task
Bedqc: improving bedqc filter brainstorming
#48 opened Jan 27, 2023 by xuebingjie1990
2
ProTip! Exclude everything labeled bug with -label:bug.