Merge pull request #11 from AndreaGuarracino/patch-1

No need for transitive queries
davidebolo1993 · Nov 14, 2024 · c7eb544 · c7eb544
2 parents 82aa524 + e39bab5
commit c7eb544
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/cosigt_smk/workflow/rules/impg.smk b/cosigt_smk/workflow/rules/impg.smk
@@ -24,8 +24,7 @@ rule impg_project:
 		'''
 		impg \
 		-p {input.paf} \
-		-b {input.bed} \
-		-x | \
+		-b {input.bed} | \
 		grep -v \
 		-f {params.exclude} > {output}
 		'''