Skip to content

Pinned Loading

  1. EVcouplings EVcouplings Public

    Evolutionary couplings from protein and RNA sequence alignments

    Jupyter Notebook 242 75

  2. EVzoom EVzoom Public

    Visually explore covariation in protein families

    JavaScript 37 6

  3. plmc plmc Public

    Inference of couplings in proteins and RNAs from sequence variation

    C 104 37

  4. EVmutation EVmutation Public

    Mutation effects predicted from sequence co-variation

    HTML 61 12

  5. EVE EVE Public

    Forked from OATML/EVE

    Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning"

    Python 8 2

  6. EVEscape EVEscape Public

    Forked from OATML-Markslab/EVEscape

    Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

    Python 1

Repositories

Showing 10 of 26 repositories
  • EVcouplings Public

    Evolutionary couplings from protein and RNA sequence alignments

    debbiemarkslab/EVcouplings’s past year of commit activity
    Jupyter Notebook 242 75 55 (2 issues need help) 5 Updated Nov 13, 2024
  • debbiemarkslab/sequenceMDS’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 22, 2024
  • popEVE Public
    debbiemarkslab/popEVE’s past year of commit activity
    Python 11 GPL-3.0 3 0 0 Updated Jul 2, 2024
  • EVEscape Public Forked from OATML-Markslab/EVEscape

    Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"

    debbiemarkslab/EVEscape’s past year of commit activity
    Python 1 MIT 9 0 1 Updated Mar 5, 2024
  • debbiemarkslab/Vax_design’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Mar 5, 2024
  • SeqDesign Public

    Protein design and variant prediction using autoregressive generative models

    debbiemarkslab/SeqDesign’s past year of commit activity
    Python 93 MIT 20 2 0 Updated Jan 23, 2024
  • nanobody-polyreactivity Public

    Polyreactivity Website

    debbiemarkslab/nanobody-polyreactivity’s past year of commit activity
    Python 9 MIT 4 1 0 Updated Jun 26, 2023
  • BEAR Public

    This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"

    debbiemarkslab/BEAR’s past year of commit activity
    Python 12 MIT 3 1 0 Updated Jun 7, 2023
  • debbiemarkslab/ZIP_benchmark’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jun 1, 2023
  • plmc Public

    Inference of couplings in proteins and RNAs from sequence variation

    debbiemarkslab/plmc’s past year of commit activity
    C 104 MIT 37 7 2 Updated Jan 21, 2023