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Pearl dingzhen patch 1 (#112) #376

Pearl dingzhen patch 1 (#112)

Pearl dingzhen patch 1 (#112) #376

Workflow file for this run

name: DMFF's python tests.
on:
push:
pull_request:
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [3.8]
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Dependencies
run: |
source $CONDA/bin/activate
$CONDA/bin/conda update -n base -c defaults conda
conda install pip
conda update pip
conda install numpy openmm pytest rdkit biopandas openbabel -c conda-forge
pip install jax networkx
pip install mdtraj==1.9.7 pymbar==4.0.1
- name: Install DMFF
run: |
source $CONDA/bin/activate
pip install .
- name: Run Tests
run: |
source $CONDA/bin/activate
pytest -vs tests/